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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
97.9
nTPM
Monaco:
161.9
nTPM
Schmiedel:
109.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.9
HPA sample
nTPM
gdT-cell nTPM: 97.9
Samples: 6
Max nTPM: 120.5
Min nTPM: 68.8
P10809_1007
68.8
P10809_1022
120.5
P10809_1041
107.1
P10809_1060
90.5
P10809_1077
98.9
P10809_1098
101.4
MAIT T-cell nTPM: 75.4
Samples: 6
Max nTPM: 107.7
Min nTPM: 57.0
P10809_1006
57.0
P10809_1024
62.3
P10809_1043
66.7
P10809_1062
88.3
P10809_1083
70.4
P10809_1097
107.7
Memory CD4 T-cell nTPM: 74.1
Samples: 6
Max nTPM: 85.3
Min nTPM: 55.8
P10809_1014
55.8
P10809_1026
85.3
P10809_1045
70.1
P10809_1064
82.4
P10809_1086
75.7
P10809_1113
75.1
Memory CD8 T-cell nTPM: 83.3
Samples: 5
Max nTPM: 107.2
Min nTPM: 67.3
P10809_1012
67.3
P10809_1027
81.8
P10809_1046
107.2
P10809_1065
84.5
P10809_1111
75.8
Naive CD4 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 39.9
Min nTPM: 19.6
P10809_1015
19.6
P10809_1030
28.9
P10809_1049
29.8
P10809_1068
34.5
P10809_1085
39.9
P10809_1112
39.9
Naive CD8 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 82.0
Min nTPM: 30.2
P10809_1016
30.2
P10809_1031
40.4
P10809_1050
50.1
P10809_1069
82.0
P10809_1087
76.9
P10809_1110
43.4
T-reg nTPM: 97.0
Samples: 6
Max nTPM: 133.1
Min nTPM: 74.4
P10809_1018
74.4
P10809_1037
89.1
P10809_1056
133.1
P10809_1075
87.5
P10809_1094
105.9
P10809_1106
92.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.6
Samples: 4
Max nTPM: 140.2
Min nTPM: 78.4
RHH5202_R3573
93.0
RHH5230_R3602
140.2
RHH5259_R3631
86.6
RHH5288_R3660
78.4
Effector memory CD8 T-cell nTPM: 161.9
Samples: 4
Max nTPM: 169.1
Min nTPM: 157.8
RHH5203_R3574
161.9
RHH5231_R3603
169.1
RHH5260_R3632
157.8
RHH5289_R3661
158.6
MAIT T-cell nTPM: 125.0
Samples: 4
Max nTPM: 141.1
Min nTPM: 96.3
RHH5233_R3605
136.7
RHH5205_R3576
141.1
RHH5262_R3634
125.8
RHH5297_R3663
96.3
Memory CD4 T-cell TFH nTPM: 89.4
Samples: 4
Max nTPM: 113.8
Min nTPM: 71.2
RHH5300_R3666
71.2
RHH5236_R3608
113.8
RHH5265_R3637
91.9
RHH5208_R3579
80.5
Memory CD4 T-cell Th1 nTPM: 95.5
Samples: 4
Max nTPM: 112.5
Min nTPM: 72.5
RHH5210_R3581
72.5
RHH5302_R3668
98.6
RHH5238_R3610
112.5
RHH5267_R3639
98.2
Memory CD4 T-cell Th1/Th17 nTPM: 133.2
Samples: 4
Max nTPM: 156.5
Min nTPM: 116.6
RHH5303_R3669
116.6
RHH5211_R3582
133.4
RHH5239_R3611
156.5
RHH5268_R3640
126.1
Memory CD4 T-cell Th17 nTPM: 125.0
Samples: 4
Max nTPM: 135.4
Min nTPM: 113.9
RHH5304_R3670
132.1
RHH5212_R3583
118.7
RHH5240_R3612
135.4
RHH5269_R3641
113.9
Memory CD4 T-cell Th2 nTPM: 106.0
Samples: 4
Max nTPM: 148.5
Min nTPM: 80.5
RHH5305_R3671
95.3
RHH5213_R3584
148.5
RHH5241_R3613
99.5
RHH5270_R3642
80.5
Naive CD4 T-cell nTPM: 47.8
Samples: 4
Max nTPM: 56.2
Min nTPM: 27.4
RHH5306_R3672
56.2
RHH5214_R3585
27.4
RHH5242_R3614
55.1
RHH5271_R3643
52.3
Naive CD8 T-cell nTPM: 51.5
Samples: 4
Max nTPM: 69.6
Min nTPM: 41.2
RHH5201_R3572
41.2
RHH5229_R3601
41.6
RHH5258_R3630
69.6
RHH5287_R3659
53.5
Non-Vd2 gdTCR nTPM: 151.6
Samples: 4
Max nTPM: 168.9
Min nTPM: 137.3
RHH5235_R3607
168.9
RHH5264_R3636
155.8
RHH5207_R3578
144.4
RHH5299_R3665
137.3
T-reg nTPM: 86.9
Samples: 4
Max nTPM: 124.9
Min nTPM: 61.3
RHH5301_R3667
73.8
RHH5237_R3609
124.9
RHH5266_R3638
61.3
RHH5209_R3580
87.5
Terminal effector memory CD4 T-cell nTPM: 155.1
Samples: 2
Max nTPM: 206.6
Min nTPM: 103.6
RHH5243_R3615
206.6
RHH5272_R3644
103.6
Terminal effector memory CD8 T-cell nTPM: 147.7
Samples: 4
Max nTPM: 184.1
Min nTPM: 111.4
RHH5232_R3604
184.1
RHH5204_R3575
111.4
RHH5261_R3633
166.2
RHH5296_R3662
129.2
Vd2 gdTCR nTPM: 124.8
Samples: 4
Max nTPM: 139.6
Min nTPM: 87.4
RHH5234_R3606
133.2
RHH5206_R3577
138.8
RHH5263_R3635
139.6
RHH5298_R3664
87.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
