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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.6
nTPM
Monaco:
241.7
nTPM
Schmiedel:
94.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.6
HPA sample
nTPM
gdT-cell nTPM: 61.6
Samples: 6
Max nTPM: 106.0
Min nTPM: 40.4
P10809_1007
40.4
P10809_1022
106.0
P10809_1041
55.2
P10809_1060
67.4
P10809_1077
47.1
P10809_1098
53.3
MAIT T-cell nTPM: 59.2
Samples: 6
Max nTPM: 67.0
Min nTPM: 45.5
P10809_1006
58.9
P10809_1024
67.0
P10809_1043
60.8
P10809_1062
57.0
P10809_1083
45.5
P10809_1097
65.8
Memory CD4 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 57.4
Min nTPM: 35.5
P10809_1014
39.3
P10809_1026
39.6
P10809_1045
46.0
P10809_1064
57.4
P10809_1086
35.5
P10809_1113
36.9
Memory CD8 T-cell nTPM: 55.2
Samples: 5
Max nTPM: 69.8
Min nTPM: 46.4
P10809_1012
48.3
P10809_1027
69.8
P10809_1046
55.7
P10809_1065
55.9
P10809_1111
46.4
Naive CD4 T-cell nTPM: 35.6
Samples: 6
Max nTPM: 43.5
Min nTPM: 26.8
P10809_1015
35.8
P10809_1030
43.5
P10809_1049
39.5
P10809_1068
26.8
P10809_1085
29.1
P10809_1112
38.8
Naive CD8 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 54.9
Min nTPM: 31.7
P10809_1016
31.7
P10809_1031
41.0
P10809_1050
41.8
P10809_1069
54.9
P10809_1087
39.4
P10809_1110
44.2
T-reg nTPM: 52.6
Samples: 6
Max nTPM: 67.5
Min nTPM: 42.8
P10809_1018
51.3
P10809_1037
67.5
P10809_1056
58.1
P10809_1075
43.1
P10809_1094
42.8
P10809_1106
52.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
241.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 115.8
Samples: 4
Max nTPM: 155.1
Min nTPM: 72.6
RHH5202_R3573
150.8
RHH5230_R3602
155.1
RHH5259_R3631
72.6
RHH5288_R3660
84.7
Effector memory CD8 T-cell nTPM: 241.7
Samples: 4
Max nTPM: 367.6
Min nTPM: 193.1
RHH5203_R3574
367.6
RHH5231_R3603
206.4
RHH5260_R3632
193.1
RHH5289_R3661
199.8
MAIT T-cell nTPM: 223.7
Samples: 4
Max nTPM: 254.6
Min nTPM: 173.1
RHH5233_R3605
254.6
RHH5205_R3576
219.3
RHH5262_R3634
247.8
RHH5297_R3663
173.1
Memory CD4 T-cell TFH nTPM: 101.0
Samples: 4
Max nTPM: 129.6
Min nTPM: 61.3
RHH5300_R3666
99.0
RHH5236_R3608
61.3
RHH5265_R3637
114.0
RHH5208_R3579
129.6
Memory CD4 T-cell Th1 nTPM: 100.5
Samples: 4
Max nTPM: 129.5
Min nTPM: 68.9
RHH5210_R3581
129.5
RHH5302_R3668
105.0
RHH5238_R3610
68.9
RHH5267_R3639
98.7
Memory CD4 T-cell Th1/Th17 nTPM: 124.7
Samples: 4
Max nTPM: 199.8
Min nTPM: 60.9
RHH5303_R3669
146.7
RHH5211_R3582
199.8
RHH5239_R3611
60.9
RHH5268_R3640
91.2
Memory CD4 T-cell Th17 nTPM: 97.4
Samples: 4
Max nTPM: 125.5
Min nTPM: 67.9
RHH5304_R3670
125.5
RHH5212_R3583
117.4
RHH5240_R3612
67.9
RHH5269_R3641
78.8
Memory CD4 T-cell Th2 nTPM: 72.4
Samples: 4
Max nTPM: 82.3
Min nTPM: 60.1
RHH5305_R3671
73.9
RHH5213_R3584
82.3
RHH5241_R3613
60.1
RHH5270_R3642
73.2
Naive CD4 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 83.0
Min nTPM: 67.0
RHH5306_R3672
83.0
RHH5214_R3585
69.0
RHH5242_R3614
73.6
RHH5271_R3643
67.0
Naive CD8 T-cell nTPM: 69.0
Samples: 4
Max nTPM: 98.9
Min nTPM: 33.1
RHH5201_R3572
98.9
RHH5229_R3601
33.1
RHH5258_R3630
63.9
RHH5287_R3659
80.1
Non-Vd2 gdTCR nTPM: 216.4
Samples: 4
Max nTPM: 288.2
Min nTPM: 124.6
RHH5235_R3607
208.2
RHH5264_R3636
244.7
RHH5207_R3578
288.2
RHH5299_R3665
124.6
T-reg nTPM: 71.1
Samples: 4
Max nTPM: 80.1
Min nTPM: 65.1
RHH5301_R3667
65.1
RHH5237_R3609
72.3
RHH5266_R3638
67.0
RHH5209_R3580
80.1
Terminal effector memory CD4 T-cell nTPM: 211.6
Samples: 2
Max nTPM: 212.6
Min nTPM: 210.6
RHH5243_R3615
212.6
RHH5272_R3644
210.6
Terminal effector memory CD8 T-cell nTPM: 204.7
Samples: 4
Max nTPM: 237.7
Min nTPM: 156.7
RHH5232_R3604
237.7
RHH5204_R3575
224.1
RHH5261_R3633
200.2
RHH5296_R3662
156.7
Vd2 gdTCR nTPM: 224.4
Samples: 4
Max nTPM: 283.3
Min nTPM: 159.1
RHH5234_R3606
212.6
RHH5206_R3577
283.3
RHH5263_R3635
242.5
RHH5298_R3664
159.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
