HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.4 nTPM
HPA Brain:32.0 nTPM
GTEx:33.4 nTPM
FANTOM5:67.8 Scaled Tags Per Million
Pig:45.5 nTPM
Mouse:32.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001535
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.8
1898 Male, age 80, left hemisphere 35.2
2621 Female, age 67, right hemisphere 33.8
2148 Female, age 91, left hemisphere 32.6
1855 Male, age 76, left hemisphere 32.1
1911 Female, age 85, right hemisphere 30.4
2529 Female, age 94, left hemisphere 26.6
Dentate gyrus
nTPM: 32.0
1927 Female, age 91, both hemispheres 35.8
2530 Female, age 94, left hemisphere 33.7
2531 Female, age 67, both hemispheres 33.7
2010 Male, age 76, both hemispheres 31.3
2246 Female, age 85, both hemispheres 29.4
2528 Male, age 74, both hemispheres 28.0
Entorhinal gyrus
nTPM: 31.4
1938 Female, age 85, left hemisphere 35.0
2613 Female, age 94, left hemisphere 31.7
1787 Male, age 76, left hemisphere 31.6
2764 Male, age 80, right hemisphere 31.4
2117 Female, age 91, right hemisphere 30.3
2686 Male, age 75, right hemisphere 28.6
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 43.6
1873 Female, age 85, both hemispheres 32.1
2045 Male, age 76, both hemispheres 31.0
2527 Male, age 74, both hemispheres 28.2
2082 Female, age 91, right hemisphere 21.2
Hippocampus, CA2
nTPM: 31.6
1940 Female, age 85, left hemisphere 39.0
1963 Male, age 80, left hemisphere 33.8
1892 Male, age 76, both hemispheres 32.0
2437 Female, age 94, left hemisphere 31.6
2249 Male, age 74, both hemispheres 27.4
2113 Female, age 91, right hemisphere 25.6
Hippocampus, CA3
nTPM: 31.4
2861 Female, age 67, both hemispheres 40.2
2137 Male, age 80, left hemisphere 35.1
1867 Male, age 76, both hemispheres 33.5
2620 Female, age 94, left hemisphere 27.2
1891 Female, age 85, both hemispheres 26.2
2436 Male, age 74, both hemispheres 26.0
Parahippocampal cortex
nTPM: 30.4
2018 Male, age 76, both hemispheres 34.3
2532 Female, age 72, left hemisphere 33.1
1933 Female, age 85, both hemispheres 32.8
1990 Female, age 91, right hemisphere 32.7
2250 Female, age 67, right hemisphere 32.2
1850 Male, age 80, both hemispheres 29.3
2622 Female, age 67, right hemisphere 29.1
2245 Female, age 91, both hemispheres 28.4
2692 Male, age 74, both hemispheres 27.2
2693 Female, age 94, both hemispheres 24.4
Perirhinal gyrus
nTPM: 30.1
2521 Female, age 94, right hemisphere 33.5
1847 Female, age 91, left hemisphere 32.7
1841 Female, age 85, right hemisphere 30.3
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 25.7
Subiculum
nTPM: 29.9
1977 Female, age 85, both hemispheres 34.5
2042 Male, age 76, both hemispheres 31.6
1901 Male, age 80, both hemispheres 30.6
2729 Female, age 91, right hemisphere 29.1
2619 Male, age 74, both hemispheres 27.1
2438 Female, age 94, left hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 65.7
Min nTPM: 12.4
Std nTPM: 8.8
Median nTPM: 32.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 58.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 56.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 53.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 53.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 50.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 49.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 48.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 48.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.8
FF:10169-103B7 60 years, female 82.0
FF:10153-102I9 76 years, female 53.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.5
Pig sample Sample description nTPM
Subiculum
nTPM: 31.8
Samples: 4

Max nTPM: 33.5
Min nTPM: 30.0
Sample A Female 33.5
Sample B Female 30.0
Sample C Male 32.1
Sample D Male 31.4
Dorsal hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 52.5
Min nTPM: 33.2
Sample A Female 48.7
Sample B Female 52.5
Sample C Male 33.2
Sample D Male 44.2
Entorhinal cortex
nTPM: 40.6
Samples: 4

Max nTPM: 45.1
Min nTPM: 33.1
Sample A Female 45.1
Sample B Female 42.4
Sample C Male 41.6
Sample D Male 33.1
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 52.6
Min nTPM: 39.6
Sample A Female 45.4
Sample B Female 39.6
Sample C Male 44.4
Sample D Male 52.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 22.0
Sample A Male 22.4
Sample B Male 22.0
Sample C Female 26.4
Sample D Female 28.7
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 34.5
Min nTPM: 29.0
Sample A Male 34.2
Sample B Male 32.8
Sample C Female 34.5
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
1461 Antisense, RP_Baylor_102857, Mouse strain C57BL/6J (56 days, male) 0.7
1460 Antisense, RP_Baylor_102857, Mouse strain C57BL/6J (56 days, male) 0.2

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