HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:20.9 nTPM
GTEx:10.1 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:26.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002119Antibody HPA005779
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
1898 Male, age 80, left hemisphere 21.9
2529 Female, age 94, left hemisphere 21.7
2621 Female, age 67, right hemisphere 21.5
1911 Female, age 85, right hemisphere 20.1
1855 Male, age 76, left hemisphere 19.6
2148 Female, age 91, left hemisphere 19.0
Dentate gyrus
nTPM: 19.5
2010 Male, age 76, both hemispheres 24.4
2528 Male, age 74, both hemispheres 20.3
2246 Female, age 85, both hemispheres 18.8
2530 Female, age 94, left hemisphere 18.7
2531 Female, age 67, both hemispheres 17.5
1927 Female, age 91, both hemispheres 17.1
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 22.8
2117 Female, age 91, right hemisphere 22.5
1787 Male, age 76, left hemisphere 22.1
2764 Male, age 80, right hemisphere 20.6
2613 Female, age 94, left hemisphere 18.6
2686 Male, age 75, right hemisphere 18.6
Hippocampus, CA1
nTPM: 20.3
1873 Female, age 85, both hemispheres 21.4
2527 Male, age 74, both hemispheres 20.9
2045 Male, age 76, both hemispheres 20.3
2749 Male, age 80, left hemisphere 20.1
2082 Female, age 91, right hemisphere 18.9
Hippocampus, CA2
nTPM: 19.9
2249 Male, age 74, both hemispheres 21.1
1892 Male, age 76, both hemispheres 20.6
1963 Male, age 80, left hemisphere 20.6
1940 Female, age 85, left hemisphere 20.4
2113 Female, age 91, right hemisphere 19.4
2437 Female, age 94, left hemisphere 17.6
Hippocampus, CA3
nTPM: 19.2
1891 Female, age 85, both hemispheres 21.3
1867 Male, age 76, both hemispheres 20.2
2620 Female, age 94, left hemisphere 20.1
2436 Male, age 74, both hemispheres 20.0
2137 Male, age 80, left hemisphere 17.0
2861 Female, age 67, both hemispheres 16.4
Parahippocampal cortex
nTPM: 20.9
2018 Male, age 76, both hemispheres 23.4
2250 Female, age 67, right hemisphere 22.7
2532 Female, age 72, left hemisphere 22.0
1850 Male, age 80, both hemispheres 21.9
1990 Female, age 91, right hemisphere 21.6
1933 Female, age 85, both hemispheres 21.4
2245 Female, age 91, both hemispheres 20.6
2692 Male, age 74, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.2
2622 Female, age 67, right hemisphere 17.9
Perirhinal gyrus
nTPM: 20.3
1841 Female, age 85, right hemisphere 22.0
2848 Male, age 76, right hemisphere 20.9
1794 Male, age 80, right hemisphere 20.2
2521 Female, age 94, right hemisphere 19.5
1847 Female, age 91, left hemisphere 18.9
Subiculum
nTPM: 20.9
2438 Female, age 94, left hemisphere 22.3
1977 Female, age 85, both hemispheres 22.0
2729 Female, age 91, right hemisphere 21.2
2619 Male, age 74, both hemispheres 20.9
1901 Male, age 80, both hemispheres 19.6
2042 Male, age 76, both hemispheres 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 21.3
Min nTPM: 6.1
Std nTPM: 1.8
Median nTPM: 9.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 14.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 14.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 13.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 13.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 13.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.2
FF:10153-102I9 76 years, female 36.1
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.7
Sample A Female 9.7
Sample B Female 12.0
Sample C Male 10.8
Sample D Male 9.8
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 9.8
Min nTPM: 9.0
Sample A Female 9.0
Sample B Female 9.5
Sample C Male 9.2
Sample D Male 9.8
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 10.3
Sample C Male 9.6
Sample D Male 9.1
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 11.1
Sample C Male 9.9
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 26.3
Min nTPM: 24.7
Sample A Male 26.3
Sample B Male 24.7
Sample C Female 25.1
Sample D Female 26.1
Hippocampal formation
nTPM: 26.7
Samples: 4

Max nTPM: 30.7
Min nTPM: 24.2
Sample A Male 27.0
Sample B Male 24.2
Sample C Female 30.7
Sample D Female 24.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
77455064 Antisense, RP_070129_02_A11, Mouse strain C57BL/6J (56 days, male) 1.6

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