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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
294.8
nTPM
Monaco:
45.4
nTPM
Schmiedel:
84.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
294.8
HPA sample
nTPM
gdT-cell nTPM: 194.3
Samples: 6
Max nTPM: 288.9
Min nTPM: 117.2
P10809_1007
117.2
P10809_1022
188.4
P10809_1041
288.9
P10809_1060
192.7
P10809_1077
141.8
P10809_1098
236.7
MAIT T-cell nTPM: 237.5
Samples: 6
Max nTPM: 347.9
Min nTPM: 98.8
P10809_1006
98.8
P10809_1024
244.9
P10809_1043
347.7
P10809_1062
213.7
P10809_1083
171.8
P10809_1097
347.9
Memory CD4 T-cell nTPM: 220.7
Samples: 6
Max nTPM: 279.4
Min nTPM: 120.8
P10809_1014
120.8
P10809_1026
272.1
P10809_1045
279.4
P10809_1064
199.8
P10809_1086
199.9
P10809_1113
252.1
Memory CD8 T-cell nTPM: 209.6
Samples: 5
Max nTPM: 279.1
Min nTPM: 117.8
P10809_1012
117.8
P10809_1027
198.6
P10809_1046
279.1
P10809_1065
203.5
P10809_1111
249.0
Naive CD4 T-cell nTPM: 294.8
Samples: 6
Max nTPM: 543.6
Min nTPM: 136.8
P10809_1015
136.8
P10809_1030
306.8
P10809_1049
543.6
P10809_1068
250.2
P10809_1085
229.2
P10809_1112
302.2
Naive CD8 T-cell nTPM: 254.8
Samples: 6
Max nTPM: 309.8
Min nTPM: 176.3
P10809_1016
176.3
P10809_1031
309.8
P10809_1050
306.8
P10809_1069
275.8
P10809_1087
186.6
P10809_1110
273.3
T-reg nTPM: 212.3
Samples: 6
Max nTPM: 357.9
Min nTPM: 100.7
P10809_1018
100.7
P10809_1037
214.8
P10809_1056
357.9
P10809_1075
184.4
P10809_1094
186.6
P10809_1106
229.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 27.4
Samples: 4
Max nTPM: 41.1
Min nTPM: 14.1
RHH5202_R3573
14.1
RHH5230_R3602
21.9
RHH5259_R3631
41.1
RHH5288_R3660
32.5
Effector memory CD8 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 36.8
Min nTPM: 11.8
RHH5203_R3574
11.8
RHH5231_R3603
21.7
RHH5260_R3632
36.8
RHH5289_R3661
22.4
MAIT T-cell nTPM: 36.4
Samples: 4
Max nTPM: 58.8
Min nTPM: 15.4
RHH5233_R3605
15.4
RHH5205_R3576
34.2
RHH5262_R3634
58.8
RHH5297_R3663
37.2
Memory CD4 T-cell TFH nTPM: 25.4
Samples: 4
Max nTPM: 34.3
Min nTPM: 19.6
RHH5300_R3666
24.6
RHH5236_R3608
34.3
RHH5265_R3637
23.1
RHH5208_R3579
19.6
Memory CD4 T-cell Th1 nTPM: 44.0
Samples: 4
Max nTPM: 69.4
Min nTPM: 24.2
RHH5210_R3581
24.2
RHH5302_R3668
46.2
RHH5238_R3610
36.1
RHH5267_R3639
69.4
Memory CD4 T-cell Th1/Th17 nTPM: 31.6
Samples: 4
Max nTPM: 39.5
Min nTPM: 23.9
RHH5303_R3669
23.9
RHH5211_R3582
33.0
RHH5239_R3611
29.8
RHH5268_R3640
39.5
Memory CD4 T-cell Th17 nTPM: 29.2
Samples: 4
Max nTPM: 43.6
Min nTPM: 14.8
RHH5304_R3670
38.0
RHH5212_R3583
14.8
RHH5240_R3612
20.4
RHH5269_R3641
43.6
Memory CD4 T-cell Th2 nTPM: 33.8
Samples: 4
Max nTPM: 44.2
Min nTPM: 12.6
RHH5305_R3671
44.2
RHH5213_R3584
42.2
RHH5241_R3613
12.6
RHH5270_R3642
36.0
Naive CD4 T-cell nTPM: 41.3
Samples: 4
Max nTPM: 65.3
Min nTPM: 20.8
RHH5306_R3672
35.3
RHH5214_R3585
43.7
RHH5242_R3614
20.8
RHH5271_R3643
65.3
Naive CD8 T-cell nTPM: 45.4
Samples: 4
Max nTPM: 54.3
Min nTPM: 38.3
RHH5201_R3572
48.1
RHH5229_R3601
40.8
RHH5258_R3630
38.3
RHH5287_R3659
54.3
Non-Vd2 gdTCR nTPM: 24.8
Samples: 4
Max nTPM: 36.0
Min nTPM: 13.4
RHH5235_R3607
36.0
RHH5264_R3636
14.6
RHH5207_R3578
13.4
RHH5299_R3665
35.3
T-reg nTPM: 30.9
Samples: 4
Max nTPM: 39.5
Min nTPM: 16.8
RHH5301_R3667
39.5
RHH5237_R3609
16.8
RHH5266_R3638
34.9
RHH5209_R3580
32.2
Terminal effector memory CD4 T-cell nTPM: 24.1
Samples: 2
Max nTPM: 30.8
Min nTPM: 17.3
RHH5243_R3615
17.3
RHH5272_R3644
30.8
Terminal effector memory CD8 T-cell nTPM: 33.1
Samples: 4
Max nTPM: 47.2
Min nTPM: 21.6
RHH5232_R3604
26.7
RHH5204_R3575
37.0
RHH5261_R3633
47.2
RHH5296_R3662
21.6
Vd2 gdTCR nTPM: 42.2
Samples: 4
Max nTPM: 75.0
Min nTPM: 19.1
RHH5234_R3606
19.1
RHH5206_R3577
75.0
RHH5263_R3635
31.5
RHH5298_R3664
43.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
