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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.9
nTPM
Monaco:
62.5
nTPM
Schmiedel:
31.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.9
HPA sample
nTPM
gdT-cell nTPM: 64.6
Samples: 6
Max nTPM: 76.5
Min nTPM: 47.3
P10809_1007
47.3
P10809_1022
74.7
P10809_1041
76.5
P10809_1060
56.3
P10809_1077
63.9
P10809_1098
68.6
MAIT T-cell nTPM: 54.7
Samples: 6
Max nTPM: 62.9
Min nTPM: 35.9
P10809_1006
35.9
P10809_1024
62.9
P10809_1043
59.0
P10809_1062
59.4
P10809_1083
49.5
P10809_1097
61.4
Memory CD4 T-cell nTPM: 80.0
Samples: 6
Max nTPM: 97.8
Min nTPM: 66.3
P10809_1014
74.9
P10809_1026
94.5
P10809_1045
66.3
P10809_1064
74.7
P10809_1086
71.5
P10809_1113
97.8
Memory CD8 T-cell nTPM: 60.8
Samples: 5
Max nTPM: 71.8
Min nTPM: 50.8
P10809_1012
50.8
P10809_1027
60.4
P10809_1046
69.8
P10809_1065
51.3
P10809_1111
71.8
Naive CD4 T-cell nTPM: 102.9
Samples: 6
Max nTPM: 126.1
Min nTPM: 69.8
P10809_1015
69.8
P10809_1030
126.1
P10809_1049
121.7
P10809_1068
102.4
P10809_1085
78.2
P10809_1112
119.2
Naive CD8 T-cell nTPM: 75.6
Samples: 6
Max nTPM: 95.2
Min nTPM: 61.1
P10809_1016
61.1
P10809_1031
95.2
P10809_1050
73.1
P10809_1069
69.4
P10809_1087
67.2
P10809_1110
87.8
T-reg nTPM: 89.2
Samples: 6
Max nTPM: 110.8
Min nTPM: 61.6
P10809_1018
61.6
P10809_1037
88.5
P10809_1056
99.2
P10809_1075
82.9
P10809_1094
110.8
P10809_1106
92.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 50.3
Min nTPM: 28.5
RHH5202_R3573
49.3
RHH5230_R3602
30.0
RHH5259_R3631
28.5
RHH5288_R3660
50.3
Effector memory CD8 T-cell nTPM: 41.1
Samples: 4
Max nTPM: 55.4
Min nTPM: 27.0
RHH5203_R3574
55.4
RHH5231_R3603
38.2
RHH5260_R3632
27.0
RHH5289_R3661
43.7
MAIT T-cell nTPM: 36.6
Samples: 4
Max nTPM: 42.7
Min nTPM: 24.5
RHH5233_R3605
42.7
RHH5205_R3576
24.5
RHH5262_R3634
37.6
RHH5297_R3663
41.4
Memory CD4 T-cell TFH nTPM: 61.6
Samples: 4
Max nTPM: 69.4
Min nTPM: 55.4
RHH5300_R3666
55.4
RHH5236_R3608
69.4
RHH5265_R3637
59.5
RHH5208_R3579
62.1
Memory CD4 T-cell Th1 nTPM: 48.2
Samples: 4
Max nTPM: 75.7
Min nTPM: 34.0
RHH5210_R3581
75.7
RHH5302_R3668
48.7
RHH5238_R3610
34.0
RHH5267_R3639
34.3
Memory CD4 T-cell Th1/Th17 nTPM: 51.3
Samples: 4
Max nTPM: 80.5
Min nTPM: 24.4
RHH5303_R3669
80.5
RHH5211_R3582
70.8
RHH5239_R3611
24.4
RHH5268_R3640
29.5
Memory CD4 T-cell Th17 nTPM: 41.6
Samples: 4
Max nTPM: 64.2
Min nTPM: 29.0
RHH5304_R3670
34.9
RHH5212_R3583
64.2
RHH5240_R3612
38.2
RHH5269_R3641
29.0
Memory CD4 T-cell Th2 nTPM: 53.3
Samples: 4
Max nTPM: 61.5
Min nTPM: 38.7
RHH5305_R3671
59.6
RHH5213_R3584
53.2
RHH5241_R3613
61.5
RHH5270_R3642
38.7
Naive CD4 T-cell nTPM: 53.9
Samples: 4
Max nTPM: 76.8
Min nTPM: 38.7
RHH5306_R3672
52.6
RHH5214_R3585
76.8
RHH5242_R3614
47.3
RHH5271_R3643
38.7
Naive CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 45.1
Min nTPM: 25.4
RHH5201_R3572
45.1
RHH5229_R3601
25.4
RHH5258_R3630
43.3
RHH5287_R3659
28.0
Non-Vd2 gdTCR nTPM: 37.9
Samples: 4
Max nTPM: 58.5
Min nTPM: 11.6
RHH5235_R3607
11.6
RHH5264_R3636
41.2
RHH5207_R3578
58.5
RHH5299_R3665
40.3
T-reg nTPM: 62.5
Samples: 4
Max nTPM: 86.5
Min nTPM: 47.3
RHH5301_R3667
68.6
RHH5237_R3609
86.5
RHH5266_R3638
47.7
RHH5209_R3580
47.3
Terminal effector memory CD4 T-cell nTPM: 31.5
Samples: 2
Max nTPM: 33.7
Min nTPM: 29.3
RHH5243_R3615
29.3
RHH5272_R3644
33.7
Terminal effector memory CD8 T-cell nTPM: 43.5
Samples: 4
Max nTPM: 55.0
Min nTPM: 28.0
RHH5232_R3604
48.6
RHH5204_R3575
55.0
RHH5261_R3633
28.0
RHH5296_R3662
42.2
Vd2 gdTCR nTPM: 48.9
Samples: 4
Max nTPM: 66.0
Min nTPM: 39.8
RHH5234_R3606
49.5
RHH5206_R3577
66.0
RHH5263_R3635
40.3
RHH5298_R3664
39.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
