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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:148.9 nTPM
FANTOM5:653.2 Scaled Tags Per Million
Pig:386.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038186
Glial cells Low
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 148.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.9
Samples: 246

Max nTPM: 408.8
Min nTPM: 0.1
Std nTPM: 78.7
Median nTPM: 143.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 408.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 407.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 365.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 332.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 312.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 311.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 309.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 307.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 293.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 291.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 290.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 287.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 284.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 282.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 277.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 274.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 270.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 269.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 265.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 263.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 263.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 263.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 261.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 260.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 257.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 256.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 254.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 251.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 249.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 248.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 245.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 244.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 240.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 238.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 238.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 237.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 232.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 230.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 229.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 222.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 220.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 219.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 218.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 214.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 213.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 208.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 208.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 208.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 208.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 208.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 207.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 206.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 204.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 203.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 200.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 199.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 198.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 198.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 195.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 195.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 193.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 192.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 192.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 191.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 187.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 187.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 184.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 184.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 183.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 183.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 183.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 182.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 182.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 182.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 182.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 181.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 179.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 178.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 178.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 172.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 172.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 172.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 172.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 171.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 169.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 169.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 168.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 168.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 167.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 165.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 163.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 161.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 161.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 161.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 160.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 160.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 160.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 160.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 159.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 159.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 155.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 154.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 152.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 150.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 150.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 147.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 146.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 145.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 145.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 144.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 143.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 142.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 142.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 141.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 140.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 138.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 137.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 136.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 135.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 133.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 132.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 132.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 130.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 129.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 128.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 128.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 127.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 127.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 126.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 125.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 124.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 124.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 123.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 119.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 118.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 117.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 116.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 111.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 110.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 109.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 108.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 105.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 105.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 104.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 103.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 102.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 99.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 95.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 95.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 93.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 88.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 88.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 87.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 86.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 83.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 81.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 80.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 79.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 75.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 75.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 73.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 65.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 65.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 64.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 46.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 40.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 40.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 31.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 28.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 27.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 22.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 19.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 0.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 0.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 653.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 653.2
FF:10164-103B2 76 years, female 653.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 386.0
Pig sample Sample description nTPM
Caudate
nTPM: 386.0
Samples: 4

Max nTPM: 479.1
Min nTPM: 301.1
Sample A Female 301.1
Sample B Female 450.9
Sample C Male 479.1
Sample D Male 312.8

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