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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
180.0
nTPM
Monaco:
201.3
nTPM
Schmiedel:
144.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.0
HPA sample
nTPM
gdT-cell nTPM: 136.3
Samples: 6
Max nTPM: 187.6
Min nTPM: 80.2
P10809_1007
80.2
P10809_1022
187.1
P10809_1041
187.6
P10809_1060
117.9
P10809_1077
126.3
P10809_1098
118.7
MAIT T-cell nTPM: 144.1
Samples: 6
Max nTPM: 206.6
Min nTPM: 78.8
P10809_1006
78.8
P10809_1024
206.6
P10809_1043
165.0
P10809_1062
145.4
P10809_1083
125.1
P10809_1097
143.7
Memory CD4 T-cell nTPM: 143.8
Samples: 6
Max nTPM: 178.8
Min nTPM: 90.3
P10809_1014
90.3
P10809_1026
169.8
P10809_1045
178.8
P10809_1064
146.3
P10809_1086
153.0
P10809_1113
124.8
Memory CD8 T-cell nTPM: 134.1
Samples: 5
Max nTPM: 163.8
Min nTPM: 90.7
P10809_1012
90.7
P10809_1027
127.2
P10809_1046
163.8
P10809_1065
161.4
P10809_1111
127.3
Naive CD4 T-cell nTPM: 142.0
Samples: 6
Max nTPM: 197.0
Min nTPM: 82.2
P10809_1015
82.2
P10809_1030
155.6
P10809_1049
197.0
P10809_1068
149.1
P10809_1085
132.3
P10809_1112
135.5
Naive CD8 T-cell nTPM: 124.6
Samples: 6
Max nTPM: 170.6
Min nTPM: 78.5
P10809_1016
78.5
P10809_1031
116.6
P10809_1050
135.1
P10809_1069
170.6
P10809_1087
132.5
P10809_1110
114.4
T-reg nTPM: 180.1
Samples: 6
Max nTPM: 273.2
Min nTPM: 104.5
P10809_1018
104.5
P10809_1037
220.3
P10809_1056
273.2
P10809_1075
173.4
P10809_1094
155.9
P10809_1106
153.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
201.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 149.0
Samples: 4
Max nTPM: 245.6
Min nTPM: 105.7
RHH5202_R3573
127.7
RHH5230_R3602
245.6
RHH5259_R3631
117.1
RHH5288_R3660
105.7
Effector memory CD8 T-cell nTPM: 188.3
Samples: 4
Max nTPM: 201.1
Min nTPM: 172.0
RHH5203_R3574
183.4
RHH5231_R3603
201.1
RHH5260_R3632
196.6
RHH5289_R3661
172.0
MAIT T-cell nTPM: 175.2
Samples: 4
Max nTPM: 188.9
Min nTPM: 159.2
RHH5233_R3605
172.9
RHH5205_R3576
188.9
RHH5262_R3634
179.8
RHH5297_R3663
159.2
Memory CD4 T-cell TFH nTPM: 147.3
Samples: 4
Max nTPM: 206.0
Min nTPM: 118.7
RHH5300_R3666
137.6
RHH5236_R3608
206.0
RHH5265_R3637
126.9
RHH5208_R3579
118.7
Memory CD4 T-cell Th1 nTPM: 144.6
Samples: 4
Max nTPM: 173.0
Min nTPM: 127.6
RHH5210_R3581
149.4
RHH5302_R3668
127.6
RHH5238_R3610
173.0
RHH5267_R3639
128.5
Memory CD4 T-cell Th1/Th17 nTPM: 162.3
Samples: 4
Max nTPM: 192.9
Min nTPM: 135.2
RHH5303_R3669
135.2
RHH5211_R3582
192.9
RHH5239_R3611
160.5
RHH5268_R3640
160.7
Memory CD4 T-cell Th17 nTPM: 194.0
Samples: 4
Max nTPM: 248.1
Min nTPM: 158.4
RHH5304_R3670
193.2
RHH5212_R3583
176.1
RHH5240_R3612
248.1
RHH5269_R3641
158.4
Memory CD4 T-cell Th2 nTPM: 156.0
Samples: 4
Max nTPM: 183.3
Min nTPM: 132.7
RHH5305_R3671
166.0
RHH5213_R3584
183.3
RHH5241_R3613
141.8
RHH5270_R3642
132.7
Naive CD4 T-cell nTPM: 144.1
Samples: 4
Max nTPM: 177.8
Min nTPM: 110.1
RHH5306_R3672
144.9
RHH5214_R3585
177.8
RHH5242_R3614
110.1
RHH5271_R3643
143.4
Naive CD8 T-cell nTPM: 120.9
Samples: 4
Max nTPM: 132.3
Min nTPM: 95.2
RHH5201_R3572
95.2
RHH5229_R3601
132.3
RHH5258_R3630
130.0
RHH5287_R3659
125.9
Non-Vd2 gdTCR nTPM: 180.9
Samples: 4
Max nTPM: 216.9
Min nTPM: 160.5
RHH5235_R3607
216.9
RHH5264_R3636
160.5
RHH5207_R3578
177.1
RHH5299_R3665
168.9
T-reg nTPM: 163.4
Samples: 4
Max nTPM: 192.5
Min nTPM: 139.6
RHH5301_R3667
139.6
RHH5237_R3609
192.5
RHH5266_R3638
166.5
RHH5209_R3580
154.9
Terminal effector memory CD4 T-cell nTPM: 201.3
Samples: 2
Max nTPM: 222.5
Min nTPM: 180.0
RHH5243_R3615
222.5
RHH5272_R3644
180.0
Terminal effector memory CD8 T-cell nTPM: 178.2
Samples: 4
Max nTPM: 217.1
Min nTPM: 143.5
RHH5232_R3604
206.6
RHH5204_R3575
143.5
RHH5261_R3633
217.1
RHH5296_R3662
145.6
Vd2 gdTCR nTPM: 180.9
Samples: 4
Max nTPM: 214.7
Min nTPM: 143.9
RHH5234_R3606
161.7
RHH5206_R3577
214.7
RHH5263_R3635
203.1
RHH5298_R3664
143.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
