We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.1
nTPM
Monaco:
65.7
nTPM
Schmiedel:
33.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.1
HPA sample
nTPM
gdT-cell nTPM: 27.4
Samples: 6
Max nTPM: 43.5
Min nTPM: 16.1
P10809_1007
20.2
P10809_1022
37.9
P10809_1041
43.5
P10809_1060
23.0
P10809_1077
16.1
P10809_1098
23.9
MAIT T-cell nTPM: 36.4
Samples: 6
Max nTPM: 52.9
Min nTPM: 25.7
P10809_1006
25.7
P10809_1024
52.9
P10809_1043
30.0
P10809_1062
31.3
P10809_1083
35.9
P10809_1097
42.3
Memory CD4 T-cell nTPM: 31.0
Samples: 6
Max nTPM: 39.0
Min nTPM: 24.4
P10809_1014
28.0
P10809_1026
30.7
P10809_1045
39.0
P10809_1064
24.4
P10809_1086
31.3
P10809_1113
32.4
Memory CD8 T-cell nTPM: 28.9
Samples: 5
Max nTPM: 32.7
Min nTPM: 24.7
P10809_1012
25.7
P10809_1027
32.0
P10809_1046
32.7
P10809_1065
24.7
P10809_1111
29.4
Naive CD4 T-cell nTPM: 42.1
Samples: 6
Max nTPM: 66.9
Min nTPM: 28.8
P10809_1015
29.7
P10809_1030
47.6
P10809_1049
66.9
P10809_1068
40.5
P10809_1085
28.8
P10809_1112
38.9
Naive CD8 T-cell nTPM: 29.7
Samples: 6
Max nTPM: 42.4
Min nTPM: 21.7
P10809_1016
24.3
P10809_1031
21.7
P10809_1050
42.4
P10809_1069
31.6
P10809_1087
26.4
P10809_1110
31.9
T-reg nTPM: 34.3
Samples: 6
Max nTPM: 39.4
Min nTPM: 24.4
P10809_1018
24.4
P10809_1037
38.7
P10809_1056
38.9
P10809_1075
35.5
P10809_1094
29.0
P10809_1106
39.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.0
Samples: 4
Max nTPM: 78.0
Min nTPM: 39.4
RHH5202_R3573
57.1
RHH5230_R3602
78.0
RHH5259_R3631
39.4
RHH5288_R3660
53.3
Effector memory CD8 T-cell nTPM: 36.8
Samples: 4
Max nTPM: 48.4
Min nTPM: 24.2
RHH5203_R3574
24.2
RHH5231_R3603
32.3
RHH5260_R3632
42.3
RHH5289_R3661
48.4
MAIT T-cell nTPM: 50.9
Samples: 4
Max nTPM: 59.1
Min nTPM: 42.2
RHH5233_R3605
51.2
RHH5205_R3576
59.1
RHH5262_R3634
42.2
RHH5297_R3663
51.2
Memory CD4 T-cell TFH nTPM: 61.7
Samples: 4
Max nTPM: 72.1
Min nTPM: 45.4
RHH5300_R3666
68.3
RHH5236_R3608
72.1
RHH5265_R3637
61.1
RHH5208_R3579
45.4
Memory CD4 T-cell Th1 nTPM: 51.3
Samples: 4
Max nTPM: 64.9
Min nTPM: 40.2
RHH5210_R3581
40.2
RHH5302_R3668
64.9
RHH5238_R3610
48.9
RHH5267_R3639
51.0
Memory CD4 T-cell Th1/Th17 nTPM: 60.3
Samples: 4
Max nTPM: 88.1
Min nTPM: 44.4
RHH5303_R3669
88.1
RHH5211_R3582
50.9
RHH5239_R3611
44.4
RHH5268_R3640
57.7
Memory CD4 T-cell Th17 nTPM: 56.3
Samples: 4
Max nTPM: 74.3
Min nTPM: 43.9
RHH5304_R3670
60.1
RHH5212_R3583
43.9
RHH5240_R3612
74.3
RHH5269_R3641
46.8
Memory CD4 T-cell Th2 nTPM: 65.7
Samples: 4
Max nTPM: 101.5
Min nTPM: 48.0
RHH5305_R3671
48.0
RHH5213_R3584
56.5
RHH5241_R3613
101.5
RHH5270_R3642
56.9
Naive CD4 T-cell nTPM: 64.7
Samples: 4
Max nTPM: 77.6
Min nTPM: 52.0
RHH5306_R3672
77.6
RHH5214_R3585
63.0
RHH5242_R3614
66.3
RHH5271_R3643
52.0
Naive CD8 T-cell nTPM: 61.1
Samples: 4
Max nTPM: 79.8
Min nTPM: 30.5
RHH5201_R3572
72.0
RHH5229_R3601
30.5
RHH5258_R3630
62.2
RHH5287_R3659
79.8
Non-Vd2 gdTCR nTPM: 36.6
Samples: 4
Max nTPM: 44.2
Min nTPM: 29.3
RHH5235_R3607
44.2
RHH5264_R3636
29.3
RHH5207_R3578
35.6
RHH5299_R3665
37.2
T-reg nTPM: 51.5
Samples: 4
Max nTPM: 87.1
Min nTPM: 38.8
RHH5301_R3667
41.0
RHH5237_R3609
87.1
RHH5266_R3638
39.2
RHH5209_R3580
38.8
Terminal effector memory CD4 T-cell nTPM: 50.1
Samples: 2
Max nTPM: 53.8
Min nTPM: 46.4
RHH5243_R3615
53.8
RHH5272_R3644
46.4
Terminal effector memory CD8 T-cell nTPM: 45.6
Samples: 4
Max nTPM: 60.7
Min nTPM: 34.2
RHH5232_R3604
60.7
RHH5204_R3575
34.2
RHH5261_R3633
43.2
RHH5296_R3662
44.1
Vd2 gdTCR nTPM: 49.8
Samples: 4
Max nTPM: 63.7
Min nTPM: 37.9
RHH5234_R3606
63.7
RHH5206_R3577
37.9
RHH5263_R3635
42.6
RHH5298_R3664
54.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
