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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
406.3
nTPM
Monaco:
180.1
nTPM
Schmiedel:
477.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
406.3
HPA sample
nTPM
gdT-cell nTPM: 265.7
Samples: 6
Max nTPM: 372.5
Min nTPM: 174.6
P10809_1007
174.6
P10809_1022
260.8
P10809_1041
372.5
P10809_1060
240.1
P10809_1077
239.9
P10809_1098
306.1
MAIT T-cell nTPM: 315.5
Samples: 6
Max nTPM: 414.6
Min nTPM: 158.2
P10809_1006
158.2
P10809_1024
335.4
P10809_1043
413.0
P10809_1062
314.9
P10809_1083
257.0
P10809_1097
414.6
Memory CD4 T-cell nTPM: 304.6
Samples: 6
Max nTPM: 355.1
Min nTPM: 219.4
P10809_1014
219.4
P10809_1026
325.2
P10809_1045
342.9
P10809_1064
302.3
P10809_1086
282.6
P10809_1113
355.1
Memory CD8 T-cell nTPM: 301.1
Samples: 5
Max nTPM: 350.4
Min nTPM: 188.2
P10809_1012
188.2
P10809_1027
324.4
P10809_1046
329.8
P10809_1065
312.5
P10809_1111
350.4
Naive CD4 T-cell nTPM: 261.2
Samples: 6
Max nTPM: 309.5
Min nTPM: 178.6
P10809_1015
178.6
P10809_1030
268.1
P10809_1049
309.5
P10809_1068
284.0
P10809_1085
243.7
P10809_1112
283.4
Naive CD8 T-cell nTPM: 273.7
Samples: 6
Max nTPM: 316.5
Min nTPM: 193.7
P10809_1016
193.7
P10809_1031
298.2
P10809_1050
316.5
P10809_1069
298.6
P10809_1087
277.5
P10809_1110
257.5
T-reg nTPM: 406.3
Samples: 6
Max nTPM: 472.9
Min nTPM: 247.1
P10809_1018
247.1
P10809_1037
440.8
P10809_1056
472.9
P10809_1075
383.1
P10809_1094
464.7
P10809_1106
429.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.6
Samples: 4
Max nTPM: 198.2
Min nTPM: 38.1
RHH5202_R3573
89.5
RHH5230_R3602
38.1
RHH5259_R3631
44.7
RHH5288_R3660
198.2
Effector memory CD8 T-cell nTPM: 93.8
Samples: 4
Max nTPM: 127.8
Min nTPM: 57.7
RHH5203_R3574
127.8
RHH5231_R3603
122.6
RHH5260_R3632
66.9
RHH5289_R3661
57.7
MAIT T-cell nTPM: 106.6
Samples: 4
Max nTPM: 185.3
Min nTPM: 66.5
RHH5233_R3605
103.8
RHH5205_R3576
70.8
RHH5262_R3634
66.5
RHH5297_R3663
185.3
Memory CD4 T-cell TFH nTPM: 162.4
Samples: 4
Max nTPM: 301.7
Min nTPM: 66.5
RHH5300_R3666
167.0
RHH5236_R3608
301.7
RHH5265_R3637
66.5
RHH5208_R3579
114.3
Memory CD4 T-cell Th1 nTPM: 140.1
Samples: 4
Max nTPM: 296.1
Min nTPM: 84.0
RHH5210_R3581
85.8
RHH5302_R3668
296.1
RHH5238_R3610
94.4
RHH5267_R3639
84.0
Memory CD4 T-cell Th1/Th17 nTPM: 154.0
Samples: 4
Max nTPM: 273.9
Min nTPM: 53.4
RHH5303_R3669
273.9
RHH5211_R3582
204.9
RHH5239_R3611
53.4
RHH5268_R3640
83.6
Memory CD4 T-cell Th17 nTPM: 106.0
Samples: 4
Max nTPM: 193.8
Min nTPM: 61.0
RHH5304_R3670
86.3
RHH5212_R3583
193.8
RHH5240_R3612
82.9
RHH5269_R3641
61.0
Memory CD4 T-cell Th2 nTPM: 112.7
Samples: 4
Max nTPM: 153.9
Min nTPM: 44.3
RHH5305_R3671
153.9
RHH5213_R3584
105.4
RHH5241_R3613
147.3
RHH5270_R3642
44.3
Naive CD4 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 154.1
Min nTPM: 52.1
RHH5306_R3672
152.0
RHH5214_R3585
154.1
RHH5242_R3614
65.8
RHH5271_R3643
52.1
Naive CD8 T-cell nTPM: 73.3
Samples: 4
Max nTPM: 115.7
Min nTPM: 53.0
RHH5201_R3572
57.6
RHH5229_R3601
53.0
RHH5258_R3630
115.7
RHH5287_R3659
66.9
Non-Vd2 gdTCR nTPM: 128.7
Samples: 4
Max nTPM: 245.5
Min nTPM: 43.6
RHH5235_R3607
43.6
RHH5264_R3636
146.2
RHH5207_R3578
79.5
RHH5299_R3665
245.5
T-reg nTPM: 139.8
Samples: 4
Max nTPM: 241.7
Min nTPM: 64.2
RHH5301_R3667
241.7
RHH5237_R3609
147.8
RHH5266_R3638
64.2
RHH5209_R3580
105.3
Terminal effector memory CD4 T-cell nTPM: 72.8
Samples: 2
Max nTPM: 90.5
Min nTPM: 55.1
RHH5243_R3615
55.1
RHH5272_R3644
90.5
Terminal effector memory CD8 T-cell nTPM: 180.1
Samples: 4
Max nTPM: 357.8
Min nTPM: 52.4
RHH5232_R3604
121.8
RHH5204_R3575
357.8
RHH5261_R3633
52.4
RHH5296_R3662
188.4
Vd2 gdTCR nTPM: 151.4
Samples: 4
Max nTPM: 247.3
Min nTPM: 65.9
RHH5234_R3606
74.9
RHH5206_R3577
247.3
RHH5263_R3635
65.9
RHH5298_R3664
217.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
