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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.3
nTPM
Monaco:
108.3
nTPM
Schmiedel:
148.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.3
HPA sample
nTPM
gdT-cell nTPM: 7.2
Samples: 6
Max nTPM: 10.2
Min nTPM: 5.3
P10809_1007
5.5
P10809_1022
5.3
P10809_1041
7.1
P10809_1060
10.2
P10809_1077
6.7
P10809_1098
8.6
MAIT T-cell nTPM: 10.6
Samples: 6
Max nTPM: 16.6
Min nTPM: 7.0
P10809_1006
7.2
P10809_1024
12.1
P10809_1043
12.5
P10809_1062
7.0
P10809_1083
16.6
P10809_1097
8.0
Memory CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 19.1
Min nTPM: 9.7
P10809_1014
9.7
P10809_1026
16.9
P10809_1045
13.9
P10809_1064
13.4
P10809_1086
14.4
P10809_1113
19.1
Memory CD8 T-cell nTPM: 7.2
Samples: 5
Max nTPM: 9.8
Min nTPM: 4.9
P10809_1012
4.9
P10809_1027
7.6
P10809_1046
8.0
P10809_1065
5.5
P10809_1111
9.8
Naive CD4 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 17.1
Min nTPM: 11.5
P10809_1015
13.8
P10809_1030
15.6
P10809_1049
17.1
P10809_1068
11.5
P10809_1085
16.1
P10809_1112
15.9
Naive CD8 T-cell nTPM: 10.6
Samples: 6
Max nTPM: 16.6
Min nTPM: 5.8
P10809_1016
9.4
P10809_1031
16.6
P10809_1050
10.3
P10809_1069
8.8
P10809_1087
5.8
P10809_1110
12.5
T-reg nTPM: 22.3
Samples: 6
Max nTPM: 32.7
Min nTPM: 9.6
P10809_1018
18.7
P10809_1037
24.9
P10809_1056
9.6
P10809_1075
27.6
P10809_1094
32.7
P10809_1106
20.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.6
Samples: 4
Max nTPM: 71.8
Min nTPM: 45.4
RHH5202_R3573
60.3
RHH5230_R3602
71.8
RHH5259_R3631
45.4
RHH5288_R3660
49.0
Effector memory CD8 T-cell nTPM: 27.0
Samples: 4
Max nTPM: 33.5
Min nTPM: 22.2
RHH5203_R3574
22.2
RHH5231_R3603
29.6
RHH5260_R3632
22.7
RHH5289_R3661
33.5
MAIT T-cell nTPM: 46.0
Samples: 4
Max nTPM: 55.4
Min nTPM: 31.3
RHH5233_R3605
31.3
RHH5205_R3576
46.7
RHH5262_R3634
50.4
RHH5297_R3663
55.4
Memory CD4 T-cell TFH nTPM: 84.9
Samples: 4
Max nTPM: 115.7
Min nTPM: 58.8
RHH5300_R3666
58.8
RHH5236_R3608
115.7
RHH5265_R3637
90.8
RHH5208_R3579
74.2
Memory CD4 T-cell Th1 nTPM: 86.6
Samples: 4
Max nTPM: 97.7
Min nTPM: 78.8
RHH5210_R3581
86.5
RHH5302_R3668
97.7
RHH5238_R3610
78.8
RHH5267_R3639
83.5
Memory CD4 T-cell Th1/Th17 nTPM: 86.6
Samples: 4
Max nTPM: 93.4
Min nTPM: 81.3
RHH5303_R3669
84.8
RHH5211_R3582
87.0
RHH5239_R3611
81.3
RHH5268_R3640
93.4
Memory CD4 T-cell Th17 nTPM: 75.7
Samples: 4
Max nTPM: 91.1
Min nTPM: 66.0
RHH5304_R3670
66.0
RHH5212_R3583
91.1
RHH5240_R3612
78.1
RHH5269_R3641
67.7
Memory CD4 T-cell Th2 nTPM: 103.0
Samples: 4
Max nTPM: 151.6
Min nTPM: 82.5
RHH5305_R3671
91.4
RHH5213_R3584
82.5
RHH5241_R3613
151.6
RHH5270_R3642
86.6
Naive CD4 T-cell nTPM: 96.8
Samples: 4
Max nTPM: 122.3
Min nTPM: 77.7
RHH5306_R3672
77.7
RHH5214_R3585
122.3
RHH5242_R3614
109.5
RHH5271_R3643
77.7
Naive CD8 T-cell nTPM: 101.3
Samples: 4
Max nTPM: 113.8
Min nTPM: 92.5
RHH5201_R3572
103.2
RHH5229_R3601
92.5
RHH5258_R3630
95.5
RHH5287_R3659
113.8
Non-Vd2 gdTCR nTPM: 16.5
Samples: 4
Max nTPM: 20.4
Min nTPM: 13.8
RHH5235_R3607
20.4
RHH5264_R3636
13.8
RHH5207_R3578
14.1
RHH5299_R3665
17.6
T-reg nTPM: 108.4
Samples: 4
Max nTPM: 133.0
Min nTPM: 86.8
RHH5301_R3667
86.8
RHH5237_R3609
111.7
RHH5266_R3638
133.0
RHH5209_R3580
101.9
Terminal effector memory CD4 T-cell nTPM: 44.0
Samples: 2
Max nTPM: 56.5
Min nTPM: 31.4
RHH5243_R3615
31.4
RHH5272_R3644
56.5
Terminal effector memory CD8 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 50.2
Min nTPM: 8.9
RHH5232_R3604
50.2
RHH5204_R3575
8.9
RHH5261_R3633
34.6
RHH5296_R3662
29.1
Vd2 gdTCR nTPM: 35.5
Samples: 4
Max nTPM: 51.9
Min nTPM: 23.9
RHH5234_R3606
51.9
RHH5206_R3577
41.2
RHH5263_R3635
23.9
RHH5298_R3664
24.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
