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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
130.5
nTPM
Monaco:
175.5
nTPM
Schmiedel:
21.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.5
HPA sample
nTPM
gdT-cell nTPM: 130.5
Samples: 6
Max nTPM: 166.9
Min nTPM: 95.0
P10809_1007
95.0
P10809_1022
166.9
P10809_1041
140.8
P10809_1060
105.0
P10809_1077
138.5
P10809_1098
136.6
MAIT T-cell nTPM: 90.2
Samples: 6
Max nTPM: 99.7
Min nTPM: 65.3
P10809_1006
65.3
P10809_1024
99.5
P10809_1043
89.1
P10809_1062
99.7
P10809_1083
88.2
P10809_1097
99.2
Memory CD4 T-cell nTPM: 96.7
Samples: 6
Max nTPM: 115.2
Min nTPM: 64.5
P10809_1014
64.5
P10809_1026
90.5
P10809_1045
106.4
P10809_1064
115.2
P10809_1086
105.2
P10809_1113
98.4
Memory CD8 T-cell nTPM: 120.4
Samples: 5
Max nTPM: 144.1
Min nTPM: 104.4
P10809_1012
104.4
P10809_1027
113.4
P10809_1046
144.1
P10809_1065
123.7
P10809_1111
116.3
Naive CD4 T-cell nTPM: 73.4
Samples: 6
Max nTPM: 94.5
Min nTPM: 49.8
P10809_1015
49.8
P10809_1030
63.5
P10809_1049
94.5
P10809_1068
71.8
P10809_1085
89.2
P10809_1112
71.6
Naive CD8 T-cell nTPM: 91.7
Samples: 6
Max nTPM: 129.8
Min nTPM: 53.5
P10809_1016
53.5
P10809_1031
74.0
P10809_1050
95.6
P10809_1069
118.5
P10809_1087
129.8
P10809_1110
78.7
T-reg nTPM: 128.5
Samples: 6
Max nTPM: 158.4
Min nTPM: 94.8
P10809_1018
126.7
P10809_1037
126.1
P10809_1056
94.8
P10809_1075
114.7
P10809_1094
158.4
P10809_1106
150.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.8
Samples: 4
Max nTPM: 120.6
Min nTPM: 66.5
RHH5202_R3573
96.8
RHH5230_R3602
79.1
RHH5259_R3631
66.5
RHH5288_R3660
120.6
Effector memory CD8 T-cell nTPM: 175.5
Samples: 4
Max nTPM: 220.5
Min nTPM: 124.8
RHH5203_R3574
210.9
RHH5231_R3603
145.6
RHH5260_R3632
124.8
RHH5289_R3661
220.5
MAIT T-cell nTPM: 120.2
Samples: 4
Max nTPM: 133.4
Min nTPM: 103.2
RHH5233_R3605
133.4
RHH5205_R3576
113.8
RHH5262_R3634
130.4
RHH5297_R3663
103.2
Memory CD4 T-cell TFH nTPM: 113.8
Samples: 4
Max nTPM: 154.5
Min nTPM: 87.6
RHH5300_R3666
103.4
RHH5236_R3608
154.5
RHH5265_R3637
109.6
RHH5208_R3579
87.6
Memory CD4 T-cell Th1 nTPM: 93.7
Samples: 4
Max nTPM: 112.3
Min nTPM: 78.9
RHH5210_R3581
86.3
RHH5302_R3668
112.3
RHH5238_R3610
78.9
RHH5267_R3639
97.4
Memory CD4 T-cell Th1/Th17 nTPM: 101.4
Samples: 4
Max nTPM: 143.4
Min nTPM: 61.2
RHH5303_R3669
143.4
RHH5211_R3582
127.5
RHH5239_R3611
61.2
RHH5268_R3640
73.3
Memory CD4 T-cell Th17 nTPM: 103.1
Samples: 4
Max nTPM: 116.8
Min nTPM: 92.3
RHH5304_R3670
99.2
RHH5212_R3583
92.3
RHH5240_R3612
116.8
RHH5269_R3641
103.9
Memory CD4 T-cell Th2 nTPM: 114.2
Samples: 4
Max nTPM: 146.5
Min nTPM: 99.2
RHH5305_R3671
146.5
RHH5213_R3584
104.3
RHH5241_R3613
99.2
RHH5270_R3642
106.7
Naive CD4 T-cell nTPM: 69.4
Samples: 4
Max nTPM: 85.5
Min nTPM: 38.3
RHH5306_R3672
85.5
RHH5214_R3585
77.3
RHH5242_R3614
38.3
RHH5271_R3643
76.4
Naive CD8 T-cell nTPM: 68.8
Samples: 4
Max nTPM: 91.2
Min nTPM: 42.4
RHH5201_R3572
84.2
RHH5229_R3601
42.4
RHH5258_R3630
91.2
RHH5287_R3659
57.2
Non-Vd2 gdTCR nTPM: 175.5
Samples: 4
Max nTPM: 207.1
Min nTPM: 124.0
RHH5235_R3607
124.0
RHH5264_R3636
207.1
RHH5207_R3578
196.2
RHH5299_R3665
174.8
T-reg nTPM: 104.6
Samples: 4
Max nTPM: 127.8
Min nTPM: 92.0
RHH5301_R3667
97.1
RHH5237_R3609
127.8
RHH5266_R3638
101.5
RHH5209_R3580
92.0
Terminal effector memory CD4 T-cell nTPM: 169.4
Samples: 2
Max nTPM: 210.4
Min nTPM: 128.3
RHH5243_R3615
128.3
RHH5272_R3644
210.4
Terminal effector memory CD8 T-cell nTPM: 169.2
Samples: 4
Max nTPM: 182.6
Min nTPM: 148.3
RHH5232_R3604
170.0
RHH5204_R3575
175.8
RHH5261_R3633
148.3
RHH5296_R3662
182.6
Vd2 gdTCR nTPM: 125.5
Samples: 4
Max nTPM: 150.3
Min nTPM: 105.6
RHH5234_R3606
105.6
RHH5206_R3577
150.3
RHH5263_R3635
137.8
RHH5298_R3664
108.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
