HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:44.4 nTPM
HPA Brain:31.6 nTPM
GTEx:44.4 nTPM
FANTOM5:60.5 Scaled Tags Per Million
Pig:38.6 nTPM
Mouse:27.6 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004835Antibody HPA073497Antibody CAB009321Antibody CAB075747
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLowNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.6
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2621 Female, age 67, right hemisphere 29.3
1855 Male, age 76, left hemisphere 28.6
2148 Female, age 91, left hemisphere 27.5
1898 Male, age 80, left hemisphere 23.2
2529 Female, age 94, left hemisphere 20.8
1911 Female, age 85, right hemisphere 20.1
Dentate gyrus
nTPM: 25.5
2010 Male, age 76, both hemispheres 28.6
2531 Female, age 67, both hemispheres 28.1
2530 Female, age 94, left hemisphere 25.5
2528 Male, age 74, both hemispheres 24.4
1927 Female, age 91, both hemispheres 23.3
2246 Female, age 85, both hemispheres 23.0
Entorhinal gyrus
nTPM: 29.4
2686 Male, age 75, right hemisphere 33.1
2613 Female, age 94, left hemisphere 32.5
2764 Male, age 80, right hemisphere 30.4
1787 Male, age 76, left hemisphere 30.2
2117 Female, age 91, right hemisphere 29.2
1938 Female, age 85, left hemisphere 20.8
Hippocampus, CA1
nTPM: 22.2
2045 Male, age 76, both hemispheres 29.0
2082 Female, age 91, right hemisphere 22.4
1873 Female, age 85, both hemispheres 22.3
2527 Male, age 74, both hemispheres 21.8
2749 Male, age 80, left hemisphere 15.6
Hippocampus, CA2
nTPM: 24.6
1940 Female, age 85, left hemisphere 30.3
2437 Female, age 94, left hemisphere 26.8
1892 Male, age 76, both hemispheres 26.6
2113 Female, age 91, right hemisphere 23.2
2249 Male, age 74, both hemispheres 21.5
1963 Male, age 80, left hemisphere 18.9
Hippocampus, CA3
nTPM: 25.0
1867 Male, age 76, both hemispheres 31.1
2861 Female, age 67, both hemispheres 29.7
2620 Female, age 94, left hemisphere 28.3
2436 Male, age 74, both hemispheres 23.6
1891 Female, age 85, both hemispheres 20.2
2137 Male, age 80, left hemisphere 17.1
Parahippocampal cortex
nTPM: 31.6
2622 Female, age 67, right hemisphere 45.7
2532 Female, age 72, left hemisphere 44.8
2693 Female, age 94, both hemispheres 32.8
2018 Male, age 76, both hemispheres 30.6
1990 Female, age 91, right hemisphere 29.5
2245 Female, age 91, both hemispheres 28.7
2250 Female, age 67, right hemisphere 28.4
1850 Male, age 80, both hemispheres 26.4
2692 Male, age 74, both hemispheres 26.4
1933 Female, age 85, both hemispheres 22.8
Perirhinal gyrus
nTPM: 26.7
2848 Male, age 76, right hemisphere 28.3
2521 Female, age 94, right hemisphere 27.6
1841 Female, age 85, right hemisphere 27.3
1794 Male, age 80, right hemisphere 27.2
1847 Female, age 91, left hemisphere 23.1
Subiculum
nTPM: 26.6
2042 Male, age 76, both hemispheres 33.7
2619 Male, age 74, both hemispheres 28.4
2729 Female, age 91, right hemisphere 27.4
2438 Female, age 94, left hemisphere 25.4
1901 Male, age 80, both hemispheres 22.5
1977 Female, age 85, both hemispheres 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 117.3
Min nTPM: 15.6
Std nTPM: 15.5
Median nTPM: 40.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 117.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 102.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 97.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 90.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 85.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 84.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 82.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 79.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 76.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 73.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.5
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 59.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.6
Pig sample Sample description nTPM
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 33.5
Min nTPM: 23.8
Sample A Female 33.5
Sample B Female 26.2
Sample C Male 23.8
Sample D Male 26.0
Dorsal hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 55.2
Min nTPM: 19.0
Sample A Female 52.4
Sample B Female 28.1
Sample C Male 55.2
Sample D Male 19.0
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 24.9
Min nTPM: 21.3
Sample A Female 23.3
Sample B Female 24.9
Sample C Male 21.3
Sample D Male 21.9
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 41.6
Min nTPM: 22.1
Sample A Female 36.1
Sample B Female 22.1
Sample C Male 41.6
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 31.7
Min nTPM: 24.6
Sample A Male 27.5
Sample B Male 25.6
Sample C Female 24.6
Sample D Female 31.7
Hippocampal formation
nTPM: 27.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 24.1
Sample A Male 24.1
Sample B Male 26.7
Sample C Female 29.5
Sample D Female 30.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70200812 Antisense, RP_050517_02_E12, Mouse strain C57BL/6J (56 days, male) 3.4
71670710 Antisense, RP_050517_02_E12, Mouse strain C57BL/6J (56 days, male) 1.2

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