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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
23.3
nTPM
Monaco:
87.5
nTPM
Schmiedel:
278.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.3
HPA sample
nTPM
gdT-cell nTPM: 20.2
Samples: 6
Max nTPM: 40.5
Min nTPM: 6.7
P10809_1007
40.5
P10809_1022
15.4
P10809_1041
26.2
P10809_1060
6.7
P10809_1077
18.8
P10809_1098
13.7
MAIT T-cell nTPM: 16.2
Samples: 6
Max nTPM: 25.9
Min nTPM: 6.5
P10809_1006
24.1
P10809_1024
6.5
P10809_1043
19.1
P10809_1062
6.9
P10809_1083
14.8
P10809_1097
25.9
Memory CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 36.9
Min nTPM: 8.5
P10809_1014
36.9
P10809_1026
24.1
P10809_1045
21.8
P10809_1064
16.0
P10809_1086
9.5
P10809_1113
8.5
Memory CD8 T-cell nTPM: 23.3
Samples: 5
Max nTPM: 40.5
Min nTPM: 12.4
P10809_1012
40.5
P10809_1027
12.4
P10809_1046
27.5
P10809_1065
18.7
P10809_1111
17.2
Naive CD4 T-cell nTPM: 11.7
Samples: 6
Max nTPM: 17.9
Min nTPM: 7.3
P10809_1015
17.9
P10809_1030
12.0
P10809_1049
12.3
P10809_1068
7.4
P10809_1085
13.4
P10809_1112
7.3
Naive CD8 T-cell nTPM: 13.8
Samples: 6
Max nTPM: 20.4
Min nTPM: 9.2
P10809_1016
20.4
P10809_1031
11.9
P10809_1050
17.4
P10809_1069
11.3
P10809_1087
9.2
P10809_1110
12.8
T-reg nTPM: 19.1
Samples: 6
Max nTPM: 38.4
Min nTPM: 10.9
P10809_1018
19.1
P10809_1037
17.5
P10809_1056
38.4
P10809_1075
10.9
P10809_1094
12.5
P10809_1106
16.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.7
Samples: 4
Max nTPM: 117.2
Min nTPM: 21.3
RHH5202_R3573
21.3
RHH5230_R3602
117.2
RHH5259_R3631
89.8
RHH5288_R3660
38.5
Effector memory CD8 T-cell nTPM: 87.5
Samples: 4
Max nTPM: 138.4
Min nTPM: 34.4
RHH5203_R3574
49.8
RHH5231_R3603
138.4
RHH5260_R3632
127.5
RHH5289_R3661
34.4
MAIT T-cell nTPM: 46.8
Samples: 4
Max nTPM: 82.0
Min nTPM: 27.0
RHH5233_R3605
27.0
RHH5205_R3576
45.8
RHH5262_R3634
82.0
RHH5297_R3663
32.2
Memory CD4 T-cell TFH nTPM: 44.2
Samples: 4
Max nTPM: 82.6
Min nTPM: 9.6
RHH5300_R3666
52.2
RHH5236_R3608
82.6
RHH5265_R3637
32.5
RHH5208_R3579
9.6
Memory CD4 T-cell Th1 nTPM: 66.3
Samples: 4
Max nTPM: 105.7
Min nTPM: 37.3
RHH5210_R3581
37.3
RHH5302_R3668
38.3
RHH5238_R3610
83.7
RHH5267_R3639
105.7
Memory CD4 T-cell Th1/Th17 nTPM: 57.8
Samples: 4
Max nTPM: 87.4
Min nTPM: 15.4
RHH5303_R3669
15.4
RHH5211_R3582
63.6
RHH5239_R3611
64.9
RHH5268_R3640
87.4
Memory CD4 T-cell Th17 nTPM: 69.1
Samples: 4
Max nTPM: 116.8
Min nTPM: 23.5
RHH5304_R3670
30.7
RHH5212_R3583
105.4
RHH5240_R3612
23.5
RHH5269_R3641
116.8
Memory CD4 T-cell Th2 nTPM: 70.7
Samples: 4
Max nTPM: 129.6
Min nTPM: 26.7
RHH5305_R3671
51.7
RHH5213_R3584
74.7
RHH5241_R3613
26.7
RHH5270_R3642
129.6
Naive CD4 T-cell nTPM: 48.0
Samples: 4
Max nTPM: 62.8
Min nTPM: 36.2
RHH5306_R3672
47.5
RHH5214_R3585
62.8
RHH5242_R3614
36.2
RHH5271_R3643
45.6
Naive CD8 T-cell nTPM: 54.5
Samples: 4
Max nTPM: 91.2
Min nTPM: 9.9
RHH5201_R3572
9.9
RHH5229_R3601
91.2
RHH5258_R3630
60.3
RHH5287_R3659
56.4
Non-Vd2 gdTCR nTPM: 65.3
Samples: 4
Max nTPM: 109.8
Min nTPM: 23.1
RHH5235_R3607
109.8
RHH5264_R3636
23.1
RHH5207_R3578
41.7
RHH5299_R3665
86.7
T-reg nTPM: 65.6
Samples: 4
Max nTPM: 80.1
Min nTPM: 46.8
RHH5301_R3667
58.7
RHH5237_R3609
80.1
RHH5266_R3638
76.9
RHH5209_R3580
46.8
Terminal effector memory CD4 T-cell nTPM: 87.2
Samples: 2
Max nTPM: 147.8
Min nTPM: 26.5
RHH5243_R3615
147.8
RHH5272_R3644
26.5
Terminal effector memory CD8 T-cell nTPM: 63.3
Samples: 4
Max nTPM: 122.2
Min nTPM: 37.6
RHH5232_R3604
48.9
RHH5204_R3575
44.4
RHH5261_R3633
122.2
RHH5296_R3662
37.6
Vd2 gdTCR nTPM: 61.8
Samples: 4
Max nTPM: 76.1
Min nTPM: 53.8
RHH5234_R3606
76.1
RHH5206_R3577
54.1
RHH5263_R3635
63.2
RHH5298_R3664
53.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
