HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:28.8 nTPM
HPA Brain:103.9 nTPM
GTEx:28.8 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:78.3 nTPM
Mouse:50.4 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055184Antibody HPA056470Antibody CAB037311
Glial cells MediumNot detectedMedium
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.9
Sample id Sample description nTPM
Hippocampus
nTPM: 103.7
1898 Male, age 80, left hemisphere 115.9
2148 Female, age 91, left hemisphere 108.5
2621 Female, age 67, right hemisphere 105.5
1855 Male, age 76, left hemisphere 104.6
2529 Female, age 94, left hemisphere 101.1
1911 Female, age 85, right hemisphere 86.4
Dentate gyrus
nTPM: 95.7
1927 Female, age 91, both hemispheres 113.0
2531 Female, age 67, both hemispheres 95.9
2010 Male, age 76, both hemispheres 95.3
2530 Female, age 94, left hemisphere 92.1
2246 Female, age 85, both hemispheres 91.2
2528 Male, age 74, both hemispheres 86.7
Entorhinal gyrus
nTPM: 92.5
2764 Male, age 80, right hemisphere 96.5
2613 Female, age 94, left hemisphere 94.0
1938 Female, age 85, left hemisphere 93.6
2686 Male, age 75, right hemisphere 93.4
1787 Male, age 76, left hemisphere 91.3
2117 Female, age 91, right hemisphere 86.3
Hippocampus, CA1
nTPM: 103.9
2749 Male, age 80, left hemisphere 148.1
1873 Female, age 85, both hemispheres 109.4
2527 Male, age 74, both hemispheres 99.3
2082 Female, age 91, right hemisphere 84.1
2045 Male, age 76, both hemispheres 78.9
Hippocampus, CA2
nTPM: 100.2
1963 Male, age 80, left hemisphere 146.2
1892 Male, age 76, both hemispheres 124.7
2113 Female, age 91, right hemisphere 90.0
2437 Female, age 94, left hemisphere 87.3
2249 Male, age 74, both hemispheres 78.3
1940 Female, age 85, left hemisphere 74.4
Hippocampus, CA3
nTPM: 98.6
2137 Male, age 80, left hemisphere 125.5
2861 Female, age 67, both hemispheres 123.7
1867 Male, age 76, both hemispheres 93.2
2620 Female, age 94, left hemisphere 85.6
1891 Female, age 85, both hemispheres 84.1
2436 Male, age 74, both hemispheres 79.2
Parahippocampal cortex
nTPM: 87.8
2245 Female, age 91, both hemispheres 104.4
1850 Male, age 80, both hemispheres 95.5
2622 Female, age 67, right hemisphere 93.8
2692 Male, age 74, both hemispheres 91.4
1933 Female, age 85, both hemispheres 90.0
1990 Female, age 91, right hemisphere 89.3
2250 Female, age 67, right hemisphere 84.2
2532 Female, age 72, left hemisphere 81.9
2693 Female, age 94, both hemispheres 77.3
2018 Male, age 76, both hemispheres 69.6
Perirhinal gyrus
nTPM: 93.8
1847 Female, age 91, left hemisphere 112.6
1794 Male, age 80, right hemisphere 94.5
2521 Female, age 94, right hemisphere 88.2
2848 Male, age 76, right hemisphere 87.0
1841 Female, age 85, right hemisphere 86.7
Subiculum
nTPM: 85.2
1901 Male, age 80, both hemispheres 90.8
2438 Female, age 94, left hemisphere 90.0
1977 Female, age 85, both hemispheres 88.5
2729 Female, age 91, right hemisphere 86.6
2619 Male, age 74, both hemispheres 84.9
2042 Male, age 76, both hemispheres 70.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.8
Samples: 197

Max nTPM: 57.1
Min nTPM: 7.9
Std nTPM: 9.0
Median nTPM: 28.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 52.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 50.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 48.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 47.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 47.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 46.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 46.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 46.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 46.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.0
FF:10153-102I9 76 years, female 48.7
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.3
Pig sample Sample description nTPM
Subiculum
nTPM: 76.3
Samples: 4

Max nTPM: 90.6
Min nTPM: 66.1
Sample A Female 90.6
Sample B Female 71.5
Sample C Male 76.8
Sample D Male 66.1
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 80.1
Min nTPM: 53.2
Sample A Female 79.4
Sample B Female 80.1
Sample C Male 70.3
Sample D Male 53.2
Entorhinal cortex
nTPM: 78.3
Samples: 4

Max nTPM: 85.9
Min nTPM: 70.6
Sample A Female 81.2
Sample B Female 75.6
Sample C Male 85.9
Sample D Male 70.6
Ventral hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 84.0
Min nTPM: 56.0
Sample A Female 66.8
Sample B Female 56.0
Sample C Male 84.0
Sample D Male 80.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 62.2
Min nTPM: 42.8
Sample A Male 49.0
Sample B Male 47.5
Sample C Female 42.8
Sample D Female 62.2
Hippocampal formation
nTPM: 42.2
Samples: 4

Max nTPM: 49.0
Min nTPM: 35.8
Sample A Male 35.8
Sample B Male 46.0
Sample C Female 49.0
Sample D Female 37.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
71281194 Antisense, RP_050818_02_C04, Mouse strain C57BL/6J (56 days, male) 8.9

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