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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
196.6
nTPM
Monaco:
214.7
nTPM
Schmiedel:
349.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.6
HPA sample
nTPM
gdT-cell nTPM: 68.0
Samples: 6
Max nTPM: 83.4
Min nTPM: 58.7
P10809_1007
63.5
P10809_1022
83.4
P10809_1041
68.5
P10809_1060
58.7
P10809_1077
66.8
P10809_1098
67.2
MAIT T-cell nTPM: 61.7
Samples: 6
Max nTPM: 71.7
Min nTPM: 49.3
P10809_1006
49.3
P10809_1024
71.7
P10809_1043
69.0
P10809_1062
64.3
P10809_1083
50.5
P10809_1097
65.6
Memory CD4 T-cell nTPM: 96.1
Samples: 6
Max nTPM: 129.1
Min nTPM: 73.8
P10809_1014
78.9
P10809_1026
121.4
P10809_1045
129.1
P10809_1064
87.1
P10809_1086
73.8
P10809_1113
86.1
Memory CD8 T-cell nTPM: 90.7
Samples: 5
Max nTPM: 115.1
Min nTPM: 66.9
P10809_1012
66.9
P10809_1027
115.1
P10809_1046
97.4
P10809_1065
72.3
P10809_1111
101.6
Naive CD4 T-cell nTPM: 113.1
Samples: 6
Max nTPM: 164.1
Min nTPM: 70.2
P10809_1015
70.2
P10809_1030
150.5
P10809_1049
164.1
P10809_1068
86.1
P10809_1085
113.7
P10809_1112
93.8
Naive CD8 T-cell nTPM: 72.1
Samples: 6
Max nTPM: 83.3
Min nTPM: 63.8
P10809_1016
63.8
P10809_1031
83.3
P10809_1050
79.2
P10809_1069
72.9
P10809_1087
65.9
P10809_1110
67.3
T-reg nTPM: 196.6
Samples: 6
Max nTPM: 228.0
Min nTPM: 160.4
P10809_1018
160.4
P10809_1037
228.0
P10809_1056
178.4
P10809_1075
212.6
P10809_1094
202.9
P10809_1106
197.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
214.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 144.2
Samples: 4
Max nTPM: 179.9
Min nTPM: 129.7
RHH5202_R3573
136.0
RHH5230_R3602
179.9
RHH5259_R3631
129.7
RHH5288_R3660
131.1
Effector memory CD8 T-cell nTPM: 161.0
Samples: 4
Max nTPM: 189.9
Min nTPM: 101.4
RHH5203_R3574
177.2
RHH5231_R3603
175.6
RHH5260_R3632
189.9
RHH5289_R3661
101.4
MAIT T-cell nTPM: 95.6
Samples: 4
Max nTPM: 113.7
Min nTPM: 68.2
RHH5233_R3605
87.8
RHH5205_R3576
113.7
RHH5262_R3634
112.5
RHH5297_R3663
68.2
Memory CD4 T-cell TFH nTPM: 136.7
Samples: 4
Max nTPM: 164.1
Min nTPM: 111.0
RHH5300_R3666
111.0
RHH5236_R3608
164.1
RHH5265_R3637
139.6
RHH5208_R3579
132.1
Memory CD4 T-cell Th1 nTPM: 176.5
Samples: 4
Max nTPM: 205.6
Min nTPM: 138.1
RHH5210_R3581
205.6
RHH5302_R3668
138.1
RHH5238_R3610
170.3
RHH5267_R3639
192.1
Memory CD4 T-cell Th1/Th17 nTPM: 162.2
Samples: 4
Max nTPM: 196.1
Min nTPM: 127.6
RHH5303_R3669
127.6
RHH5211_R3582
196.1
RHH5239_R3611
151.8
RHH5268_R3640
173.2
Memory CD4 T-cell Th17 nTPM: 148.3
Samples: 4
Max nTPM: 172.7
Min nTPM: 106.3
RHH5304_R3670
106.3
RHH5212_R3583
167.8
RHH5240_R3612
172.7
RHH5269_R3641
146.2
Memory CD4 T-cell Th2 nTPM: 157.2
Samples: 4
Max nTPM: 180.0
Min nTPM: 121.5
RHH5305_R3671
121.5
RHH5213_R3584
177.9
RHH5241_R3613
149.5
RHH5270_R3642
180.0
Naive CD4 T-cell nTPM: 214.7
Samples: 4
Max nTPM: 240.1
Min nTPM: 172.1
RHH5306_R3672
172.1
RHH5214_R3585
223.0
RHH5242_R3614
223.6
RHH5271_R3643
240.1
Naive CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 173.4
Min nTPM: 157.8
RHH5201_R3572
157.8
RHH5229_R3601
158.2
RHH5258_R3630
159.6
RHH5287_R3659
173.4
Non-Vd2 gdTCR nTPM: 126.9
Samples: 4
Max nTPM: 162.3
Min nTPM: 99.2
RHH5235_R3607
162.3
RHH5264_R3636
127.7
RHH5207_R3578
118.5
RHH5299_R3665
99.2
T-reg nTPM: 172.4
Samples: 4
Max nTPM: 205.3
Min nTPM: 147.7
RHH5301_R3667
147.7
RHH5237_R3609
187.0
RHH5266_R3638
205.3
RHH5209_R3580
149.5
Terminal effector memory CD4 T-cell nTPM: 133.3
Samples: 2
Max nTPM: 145.4
Min nTPM: 121.2
RHH5243_R3615
145.4
RHH5272_R3644
121.2
Terminal effector memory CD8 T-cell nTPM: 119.2
Samples: 4
Max nTPM: 143.9
Min nTPM: 94.8
RHH5232_R3604
129.4
RHH5204_R3575
108.7
RHH5261_R3633
143.9
RHH5296_R3662
94.8
Vd2 gdTCR nTPM: 131.4
Samples: 4
Max nTPM: 155.2
Min nTPM: 115.3
RHH5234_R3606
123.5
RHH5206_R3577
131.6
RHH5263_R3635
155.2
RHH5298_R3664
115.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
