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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
372.2
nTPM
Monaco:
70.6
nTPM
Schmiedel:
5.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
372.2
HPA sample
nTPM
gdT-cell nTPM: 234.2
Samples: 6
Max nTPM: 272.1
Min nTPM: 170.4
P10809_1007
170.4
P10809_1022
245.1
P10809_1041
272.1
P10809_1060
212.6
P10809_1077
270.5
P10809_1098
234.3
MAIT T-cell nTPM: 252.7
Samples: 6
Max nTPM: 295.8
Min nTPM: 146.9
P10809_1006
146.9
P10809_1024
283.7
P10809_1043
266.8
P10809_1062
269.8
P10809_1083
253.1
P10809_1097
295.8
Memory CD4 T-cell nTPM: 270.9
Samples: 6
Max nTPM: 317.0
Min nTPM: 173.5
P10809_1014
173.5
P10809_1026
317.0
P10809_1045
307.5
P10809_1064
262.8
P10809_1086
278.6
P10809_1113
285.9
Memory CD8 T-cell nTPM: 252.5
Samples: 5
Max nTPM: 277.7
Min nTPM: 178.9
P10809_1012
178.9
P10809_1027
277.7
P10809_1046
277.7
P10809_1065
260.0
P10809_1111
268.0
Naive CD4 T-cell nTPM: 281.3
Samples: 6
Max nTPM: 378.1
Min nTPM: 173.8
P10809_1015
173.8
P10809_1030
308.9
P10809_1049
378.1
P10809_1068
275.0
P10809_1085
266.0
P10809_1112
286.0
Naive CD8 T-cell nTPM: 256.9
Samples: 6
Max nTPM: 306.1
Min nTPM: 174.4
P10809_1016
174.4
P10809_1031
306.1
P10809_1050
245.6
P10809_1069
302.7
P10809_1087
251.0
P10809_1110
261.7
T-reg nTPM: 372.2
Samples: 6
Max nTPM: 460.5
Min nTPM: 211.8
P10809_1018
211.8
P10809_1037
401.6
P10809_1056
460.5
P10809_1075
347.9
P10809_1094
384.8
P10809_1106
426.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 37.8
Samples: 4
Max nTPM: 70.8
Min nTPM: 9.8
RHH5202_R3573
34.3
RHH5230_R3602
9.8
RHH5259_R3631
36.1
RHH5288_R3660
70.8
Effector memory CD8 T-cell nTPM: 39.8
Samples: 4
Max nTPM: 52.5
Min nTPM: 28.7
RHH5203_R3574
52.5
RHH5231_R3603
28.7
RHH5260_R3632
41.5
RHH5289_R3661
36.6
MAIT T-cell nTPM: 45.9
Samples: 4
Max nTPM: 70.8
Min nTPM: 32.9
RHH5233_R3605
36.3
RHH5205_R3576
32.9
RHH5262_R3634
43.4
RHH5297_R3663
70.8
Memory CD4 T-cell TFH nTPM: 70.6
Samples: 4
Max nTPM: 103.4
Min nTPM: 47.0
RHH5300_R3666
53.8
RHH5236_R3608
103.4
RHH5265_R3637
47.0
RHH5208_R3579
78.1
Memory CD4 T-cell Th1 nTPM: 50.8
Samples: 4
Max nTPM: 77.6
Min nTPM: 40.4
RHH5210_R3581
41.5
RHH5302_R3668
77.6
RHH5238_R3610
43.8
RHH5267_R3639
40.4
Memory CD4 T-cell Th1/Th17 nTPM: 49.3
Samples: 4
Max nTPM: 65.8
Min nTPM: 16.9
RHH5303_R3669
65.8
RHH5211_R3582
65.0
RHH5239_R3611
16.9
RHH5268_R3640
49.3
Memory CD4 T-cell Th17 nTPM: 39.6
Samples: 4
Max nTPM: 76.8
Min nTPM: 20.2
RHH5304_R3670
33.1
RHH5212_R3583
76.8
RHH5240_R3612
20.2
RHH5269_R3641
28.3
Memory CD4 T-cell Th2 nTPM: 47.8
Samples: 4
Max nTPM: 55.8
Min nTPM: 39.4
RHH5305_R3671
55.8
RHH5213_R3584
49.7
RHH5241_R3613
46.4
RHH5270_R3642
39.4
Naive CD4 T-cell nTPM: 57.8
Samples: 4
Max nTPM: 85.7
Min nTPM: 42.1
RHH5306_R3672
53.3
RHH5214_R3585
85.7
RHH5242_R3614
50.2
RHH5271_R3643
42.1
Naive CD8 T-cell nTPM: 44.3
Samples: 4
Max nTPM: 83.5
Min nTPM: 16.1
RHH5201_R3572
34.5
RHH5229_R3601
16.1
RHH5258_R3630
83.5
RHH5287_R3659
43.2
Non-Vd2 gdTCR nTPM: 51.8
Samples: 4
Max nTPM: 84.3
Min nTPM: 20.3
RHH5235_R3607
20.3
RHH5264_R3636
48.5
RHH5207_R3578
54.1
RHH5299_R3665
84.3
T-reg nTPM: 69.8
Samples: 4
Max nTPM: 96.9
Min nTPM: 45.8
RHH5301_R3667
96.9
RHH5237_R3609
78.6
RHH5266_R3638
45.8
RHH5209_R3580
57.7
Terminal effector memory CD4 T-cell nTPM: 33.2
Samples: 2
Max nTPM: 53.4
Min nTPM: 12.9
RHH5243_R3615
12.9
RHH5272_R3644
53.4
Terminal effector memory CD8 T-cell nTPM: 63.0
Samples: 4
Max nTPM: 117.7
Min nTPM: 33.2
RHH5232_R3604
33.2
RHH5204_R3575
117.7
RHH5261_R3633
33.6
RHH5296_R3662
67.3
Vd2 gdTCR nTPM: 55.3
Samples: 4
Max nTPM: 77.5
Min nTPM: 32.3
RHH5234_R3606
32.3
RHH5206_R3577
72.6
RHH5263_R3635
38.6
RHH5298_R3664
77.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
