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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
408.2
nTPM
Monaco:
73.1
nTPM
Schmiedel:
55.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
408.2
HPA sample
nTPM
gdT-cell nTPM: 243.6
Samples: 6
Max nTPM: 325.0
Min nTPM: 172.2
P10809_1007
239.8
P10809_1022
325.0
P10809_1041
298.2
P10809_1060
200.5
P10809_1077
226.0
P10809_1098
172.2
MAIT T-cell nTPM: 225.0
Samples: 6
Max nTPM: 302.9
Min nTPM: 175.8
P10809_1006
175.8
P10809_1024
302.9
P10809_1043
288.4
P10809_1062
207.8
P10809_1083
182.1
P10809_1097
193.0
Memory CD4 T-cell nTPM: 316.5
Samples: 6
Max nTPM: 472.5
Min nTPM: 228.2
P10809_1014
289.2
P10809_1026
472.5
P10809_1045
355.8
P10809_1064
308.6
P10809_1086
228.2
P10809_1113
244.4
Memory CD8 T-cell nTPM: 255.5
Samples: 5
Max nTPM: 348.4
Min nTPM: 182.8
P10809_1012
233.4
P10809_1027
348.4
P10809_1046
272.1
P10809_1065
240.8
P10809_1111
182.8
Naive CD4 T-cell nTPM: 221.6
Samples: 6
Max nTPM: 350.8
Min nTPM: 160.0
P10809_1015
216.6
P10809_1030
350.8
P10809_1049
196.1
P10809_1068
225.1
P10809_1085
181.1
P10809_1112
160.0
Naive CD8 T-cell nTPM: 218.3
Samples: 6
Max nTPM: 310.6
Min nTPM: 142.5
P10809_1016
230.6
P10809_1031
310.6
P10809_1050
189.2
P10809_1069
243.5
P10809_1087
193.6
P10809_1110
142.5
T-reg nTPM: 408.2
Samples: 6
Max nTPM: 527.1
Min nTPM: 330.8
P10809_1018
330.8
P10809_1037
527.1
P10809_1056
436.8
P10809_1075
416.5
P10809_1094
387.1
P10809_1106
351.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 66.6
Min nTPM: 38.6
RHH5202_R3573
38.6
RHH5230_R3602
52.2
RHH5259_R3631
66.6
RHH5288_R3660
57.2
Effector memory CD8 T-cell nTPM: 40.1
Samples: 4
Max nTPM: 48.6
Min nTPM: 32.2
RHH5203_R3574
32.2
RHH5231_R3603
35.1
RHH5260_R3632
48.6
RHH5289_R3661
44.3
MAIT T-cell nTPM: 49.4
Samples: 4
Max nTPM: 52.8
Min nTPM: 46.8
RHH5233_R3605
46.8
RHH5205_R3576
50.8
RHH5262_R3634
47.2
RHH5297_R3663
52.8
Memory CD4 T-cell TFH nTPM: 63.0
Samples: 4
Max nTPM: 93.1
Min nTPM: 49.0
RHH5300_R3666
51.6
RHH5236_R3608
93.1
RHH5265_R3637
49.0
RHH5208_R3579
58.4
Memory CD4 T-cell Th1 nTPM: 73.2
Samples: 4
Max nTPM: 123.1
Min nTPM: 35.4
RHH5210_R3581
35.4
RHH5302_R3668
82.2
RHH5238_R3610
123.1
RHH5267_R3639
51.9
Memory CD4 T-cell Th1/Th17 nTPM: 58.8
Samples: 4
Max nTPM: 71.0
Min nTPM: 28.9
RHH5303_R3669
71.0
RHH5211_R3582
28.9
RHH5239_R3611
65.0
RHH5268_R3640
70.4
Memory CD4 T-cell Th17 nTPM: 67.7
Samples: 4
Max nTPM: 80.6
Min nTPM: 53.3
RHH5304_R3670
80.6
RHH5212_R3583
53.3
RHH5240_R3612
74.3
RHH5269_R3641
62.5
Memory CD4 T-cell Th2 nTPM: 61.8
Samples: 4
Max nTPM: 96.0
Min nTPM: 42.2
RHH5305_R3671
96.0
RHH5213_R3584
42.2
RHH5241_R3613
51.2
RHH5270_R3642
57.6
Naive CD4 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 64.1
Min nTPM: 43.4
RHH5306_R3672
64.1
RHH5214_R3585
60.1
RHH5242_R3614
43.4
RHH5271_R3643
52.1
Naive CD8 T-cell nTPM: 42.9
Samples: 4
Max nTPM: 79.7
Min nTPM: 26.3
RHH5201_R3572
26.3
RHH5229_R3601
38.8
RHH5258_R3630
26.6
RHH5287_R3659
79.7
Non-Vd2 gdTCR nTPM: 63.1
Samples: 4
Max nTPM: 79.6
Min nTPM: 45.2
RHH5235_R3607
78.1
RHH5264_R3636
49.6
RHH5207_R3578
45.2
RHH5299_R3665
79.6
T-reg nTPM: 60.8
Samples: 4
Max nTPM: 79.2
Min nTPM: 51.2
RHH5301_R3667
79.2
RHH5237_R3609
55.7
RHH5266_R3638
51.2
RHH5209_R3580
57.1
Terminal effector memory CD4 T-cell nTPM: 39.7
Samples: 2
Max nTPM: 42.9
Min nTPM: 36.4
RHH5243_R3615
42.9
RHH5272_R3644
36.4
Terminal effector memory CD8 T-cell nTPM: 63.6
Samples: 4
Max nTPM: 125.6
Min nTPM: 27.0
RHH5232_R3604
27.0
RHH5204_R3575
125.6
RHH5261_R3633
61.2
RHH5296_R3662
40.5
Vd2 gdTCR nTPM: 73.1
Samples: 4
Max nTPM: 126.1
Min nTPM: 43.2
RHH5234_R3606
52.0
RHH5206_R3577
126.1
RHH5263_R3635
43.2
RHH5298_R3664
71.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
