HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.7 nTPM
HPA Brain:15.2 nTPM
GTEx:21.7 nTPM
FANTOM5:32.8 Scaled Tags Per Million
Pig:0.7 nTPM
Mouse:0.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019165
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
2148 Female, age 91, left hemisphere 16.7
2621 Female, age 67, right hemisphere 15.9
1855 Male, age 76, left hemisphere 13.3
1911 Female, age 85, right hemisphere 13.2
2529 Female, age 94, left hemisphere 11.7
1898 Male, age 80, left hemisphere 9.1
Dentate gyrus
nTPM: 14.6
2531 Female, age 67, both hemispheres 26.7
2246 Female, age 85, both hemispheres 16.5
1927 Female, age 91, both hemispheres 13.9
2528 Male, age 74, both hemispheres 11.2
2530 Female, age 94, left hemisphere 10.5
2010 Male, age 76, both hemispheres 9.1
Entorhinal gyrus
nTPM: 12.6
2613 Female, age 94, left hemisphere 17.2
2686 Male, age 75, right hemisphere 13.5
1787 Male, age 76, left hemisphere 13.4
1938 Female, age 85, left hemisphere 12.2
2764 Male, age 80, right hemisphere 12.0
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 13.2
2045 Male, age 76, both hemispheres 19.8
1873 Female, age 85, both hemispheres 12.4
2082 Female, age 91, right hemisphere 12.1
2749 Male, age 80, left hemisphere 11.5
2527 Male, age 74, both hemispheres 10.3
Hippocampus, CA2
nTPM: 12.1
1892 Male, age 76, both hemispheres 14.3
1940 Female, age 85, left hemisphere 13.5
2113 Female, age 91, right hemisphere 12.7
2437 Female, age 94, left hemisphere 12.6
2249 Male, age 74, both hemispheres 10.5
1963 Male, age 80, left hemisphere 8.8
Hippocampus, CA3
nTPM: 15.2
2861 Female, age 67, both hemispheres 22.2
2620 Female, age 94, left hemisphere 19.7
2137 Male, age 80, left hemisphere 14.2
1867 Male, age 76, both hemispheres 13.1
1891 Female, age 85, both hemispheres 10.9
2436 Male, age 74, both hemispheres 10.9
Parahippocampal cortex
nTPM: 12.3
2622 Female, age 67, right hemisphere 19.1
2532 Female, age 72, left hemisphere 17.5
2018 Male, age 76, both hemispheres 12.6
2250 Female, age 67, right hemisphere 12.5
2245 Female, age 91, both hemispheres 12.4
1933 Female, age 85, both hemispheres 11.3
2693 Female, age 94, both hemispheres 10.8
1850 Male, age 80, both hemispheres 9.0
1990 Female, age 91, right hemisphere 8.9
2692 Male, age 74, both hemispheres 8.3
Perirhinal gyrus
nTPM: 11.4
1841 Female, age 85, right hemisphere 13.1
2848 Male, age 76, right hemisphere 11.9
1794 Male, age 80, right hemisphere 11.1
1847 Female, age 91, left hemisphere 10.6
2521 Female, age 94, right hemisphere 10.4
Subiculum
nTPM: 10.1
1977 Female, age 85, both hemispheres 12.4
2729 Female, age 91, right hemisphere 11.9
1901 Male, age 80, both hemispheres 9.6
2438 Female, age 94, left hemisphere 9.6
2042 Male, age 76, both hemispheres 9.3
2619 Male, age 74, both hemispheres 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 54.9
Min nTPM: 3.4
Std nTPM: 10.5
Median nTPM: 19.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 54.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 53.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 51.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 47.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 45.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 43.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 43.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 42.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.8
FF:10153-102I9 76 years, female 44.9
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.7
Pig sample Sample description nTPM
Subiculum
nTPM: 0.7
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.4
Sample A Female 0.5
Sample B Female 0.7
Sample C Male 1.1
Sample D Male 0.4
Dorsal hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.4
Sample C Male 0.3
Sample D Male 0.1
Entorhinal cortex
nTPM: 0.5
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.8
Sample C Male 1.2
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.5
Sample C Male 1.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71919631 Antisense, RP_051012_02_G03, Mouse strain C57BL/6J (56 days, male) 0.0

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