HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:13.2 nTPM
HPA Brain:97.7 nTPM
GTEx:13.2 nTPM
FANTOM5:147.3 Scaled Tags Per Million
Pig:66.1 nTPM
Mouse:55.6 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045245Antibody HPA048161
Glial cells HighLow
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.7
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
2621 Female, age 67, right hemisphere 89.2
1911 Female, age 85, right hemisphere 86.6
2148 Female, age 91, left hemisphere 86.4
2529 Female, age 94, left hemisphere 86.4
1898 Male, age 80, left hemisphere 84.4
1855 Male, age 76, left hemisphere 73.9
Dentate gyrus
nTPM: 83.6
2010 Male, age 76, both hemispheres 88.4
2528 Male, age 74, both hemispheres 86.1
2531 Female, age 67, both hemispheres 83.0
2530 Female, age 94, left hemisphere 82.7
1927 Female, age 91, both hemispheres 81.7
2246 Female, age 85, both hemispheres 80.0
Entorhinal gyrus
nTPM: 90.2
2117 Female, age 91, right hemisphere 114.0
2764 Male, age 80, right hemisphere 106.6
2613 Female, age 94, left hemisphere 99.3
1938 Female, age 85, left hemisphere 75.7
2686 Male, age 75, right hemisphere 75.4
1787 Male, age 76, left hemisphere 70.4
Hippocampus, CA1
nTPM: 85.1
2082 Female, age 91, right hemisphere 89.3
2527 Male, age 74, both hemispheres 87.3
1873 Female, age 85, both hemispheres 83.6
2045 Male, age 76, both hemispheres 83.2
2749 Male, age 80, left hemisphere 82.1
Hippocampus, CA2
nTPM: 85.0
2249 Male, age 74, both hemispheres 94.2
1963 Male, age 80, left hemisphere 92.7
2113 Female, age 91, right hemisphere 87.2
1892 Male, age 76, both hemispheres 85.8
2437 Female, age 94, left hemisphere 78.0
1940 Female, age 85, left hemisphere 71.8
Hippocampus, CA3
nTPM: 90.3
2620 Female, age 94, left hemisphere 121.7
1891 Female, age 85, both hemispheres 104.7
1867 Male, age 76, both hemispheres 97.2
2137 Male, age 80, left hemisphere 79.7
2436 Male, age 74, both hemispheres 71.2
2861 Female, age 67, both hemispheres 67.3
Parahippocampal cortex
nTPM: 81.5
2692 Male, age 74, both hemispheres 104.4
1990 Female, age 91, right hemisphere 97.8
2532 Female, age 72, left hemisphere 86.0
2693 Female, age 94, both hemispheres 80.4
1850 Male, age 80, both hemispheres 80.1
2245 Female, age 91, both hemispheres 79.9
2018 Male, age 76, both hemispheres 78.5
1933 Female, age 85, both hemispheres 78.2
2622 Female, age 67, right hemisphere 66.3
2250 Female, age 67, right hemisphere 63.6
Perirhinal gyrus
nTPM: 73.4
2521 Female, age 94, right hemisphere 84.4
1847 Female, age 91, left hemisphere 79.1
1794 Male, age 80, right hemisphere 78.1
1841 Female, age 85, right hemisphere 63.2
2848 Male, age 76, right hemisphere 62.1
Subiculum
nTPM: 97.7
1901 Male, age 80, both hemispheres 111.5
2619 Male, age 74, both hemispheres 105.2
1977 Female, age 85, both hemispheres 100.6
2042 Male, age 76, both hemispheres 93.9
2729 Female, age 91, right hemisphere 87.7
2438 Female, age 94, left hemisphere 87.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 47.4
Min nTPM: 3.3
Std nTPM: 6.4
Median nTPM: 11.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 41.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 31.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 28.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 26.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 24.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 24.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 24.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.3
FF:10153-102I9 76 years, female 178.4
FF:10169-103B7 60 years, female 116.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.1
Pig sample Sample description nTPM
Subiculum
nTPM: 43.9
Samples: 4

Max nTPM: 48.3
Min nTPM: 39.2
Sample A Female 48.3
Sample B Female 44.5
Sample C Male 43.5
Sample D Male 39.2
Dorsal hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 81.1
Min nTPM: 46.6
Sample A Female 81.1
Sample B Female 65.1
Sample C Male 71.8
Sample D Male 46.6
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 50.3
Min nTPM: 42.1
Sample A Female 48.9
Sample B Female 50.3
Sample C Male 42.1
Sample D Male 48.9
Ventral hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 68.4
Min nTPM: 41.5
Sample A Female 57.9
Sample B Female 41.5
Sample C Male 66.0
Sample D Male 68.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.2
Samples: 4

Max nTPM: 51.4
Min nTPM: 44.4
Sample A Male 47.4
Sample B Male 44.4
Sample C Female 45.5
Sample D Female 51.4
Hippocampal formation
nTPM: 55.6
Samples: 4

Max nTPM: 63.5
Min nTPM: 47.5
Sample A Male 47.5
Sample B Male 56.0
Sample C Female 63.5
Sample D Female 55.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69529059 Antisense, RP_050421_03_D07, Mouse strain C57BL/6J (56 days, male) 3.7
74881867 Antisense, RP_060315_04_D06, Mouse strain C57BL/6J (56 days, male) 1.8

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