We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
387.2
nTPM
Monaco:
625.3
nTPM
Schmiedel:
378.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
387.2
HPA sample
nTPM
gdT-cell nTPM: 60.2
Samples: 6
Max nTPM: 91.2
Min nTPM: 21.3
P10809_1007
58.1
P10809_1022
68.6
P10809_1041
91.2
P10809_1060
59.3
P10809_1077
21.3
P10809_1098
62.7
MAIT T-cell nTPM: 387.3
Samples: 6
Max nTPM: 557.8
Min nTPM: 315.4
P10809_1006
315.4
P10809_1024
557.8
P10809_1043
399.9
P10809_1062
388.2
P10809_1083
338.4
P10809_1097
323.8
Memory CD4 T-cell nTPM: 107.7
Samples: 6
Max nTPM: 181.5
Min nTPM: 69.4
P10809_1014
88.6
P10809_1026
181.5
P10809_1045
120.4
P10809_1064
91.6
P10809_1086
69.4
P10809_1113
94.6
Memory CD8 T-cell nTPM: 113.7
Samples: 5
Max nTPM: 144.8
Min nTPM: 87.3
P10809_1012
123.0
P10809_1027
105.6
P10809_1046
144.8
P10809_1065
87.3
P10809_1111
108.0
Naive CD4 T-cell nTPM: 125.1
Samples: 6
Max nTPM: 201.4
Min nTPM: 73.4
P10809_1015
82.0
P10809_1030
201.4
P10809_1049
189.5
P10809_1068
113.1
P10809_1085
73.4
P10809_1112
91.3
Naive CD8 T-cell nTPM: 103.5
Samples: 6
Max nTPM: 183.6
Min nTPM: 18.7
P10809_1016
122.6
P10809_1031
183.6
P10809_1050
115.8
P10809_1069
85.2
P10809_1087
18.7
P10809_1110
94.9
T-reg nTPM: 191.8
Samples: 6
Max nTPM: 268.1
Min nTPM: 110.4
P10809_1018
110.4
P10809_1037
268.1
P10809_1056
237.8
P10809_1075
202.6
P10809_1094
139.3
P10809_1106
192.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
625.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 166.3
Samples: 4
Max nTPM: 239.7
Min nTPM: 101.4
RHH5202_R3573
239.7
RHH5230_R3602
152.9
RHH5259_R3631
101.4
RHH5288_R3660
171.1
Effector memory CD8 T-cell nTPM: 173.8
Samples: 4
Max nTPM: 244.4
Min nTPM: 126.4
RHH5203_R3574
244.4
RHH5231_R3603
139.5
RHH5260_R3632
126.4
RHH5289_R3661
184.8
MAIT T-cell nTPM: 625.2
Samples: 4
Max nTPM: 753.1
Min nTPM: 573.9
RHH5233_R3605
753.1
RHH5205_R3576
580.5
RHH5262_R3634
573.9
RHH5297_R3663
593.4
Memory CD4 T-cell TFH nTPM: 117.8
Samples: 4
Max nTPM: 140.5
Min nTPM: 103.7
RHH5300_R3666
121.7
RHH5236_R3608
105.3
RHH5265_R3637
103.7
RHH5208_R3579
140.5
Memory CD4 T-cell Th1 nTPM: 134.8
Samples: 4
Max nTPM: 188.4
Min nTPM: 78.5
RHH5210_R3581
188.4
RHH5302_R3668
166.5
RHH5238_R3610
78.5
RHH5267_R3639
105.9
Memory CD4 T-cell Th1/Th17 nTPM: 239.5
Samples: 4
Max nTPM: 343.8
Min nTPM: 119.0
RHH5303_R3669
323.8
RHH5211_R3582
343.8
RHH5239_R3611
119.0
RHH5268_R3640
171.5
Memory CD4 T-cell Th17 nTPM: 280.6
Samples: 4
Max nTPM: 369.9
Min nTPM: 197.9
RHH5304_R3670
288.8
RHH5212_R3583
369.9
RHH5240_R3612
265.8
RHH5269_R3641
197.9
Memory CD4 T-cell Th2 nTPM: 115.1
Samples: 4
Max nTPM: 151.4
Min nTPM: 91.3
RHH5305_R3671
118.1
RHH5213_R3584
151.4
RHH5241_R3613
99.7
RHH5270_R3642
91.3
Naive CD4 T-cell nTPM: 174.5
Samples: 4
Max nTPM: 245.5
Min nTPM: 138.5
RHH5306_R3672
151.1
RHH5214_R3585
245.5
RHH5242_R3614
138.5
RHH5271_R3643
162.7
Naive CD8 T-cell nTPM: 248.7
Samples: 4
Max nTPM: 345.2
Min nTPM: 132.5
RHH5201_R3572
345.2
RHH5229_R3601
132.5
RHH5258_R3630
258.9
RHH5287_R3659
258.2
Non-Vd2 gdTCR nTPM: 31.3
Samples: 4
Max nTPM: 39.2
Min nTPM: 27.3
RHH5235_R3607
39.2
RHH5264_R3636
29.4
RHH5207_R3578
27.3
RHH5299_R3665
29.2
T-reg nTPM: 166.1
Samples: 4
Max nTPM: 203.3
Min nTPM: 130.3
RHH5301_R3667
178.0
RHH5237_R3609
152.9
RHH5266_R3638
130.3
RHH5209_R3580
203.3
Terminal effector memory CD4 T-cell nTPM: 20.0
Samples: 2
Max nTPM: 39.9
Min nTPM: 0.1
RHH5243_R3615
0.1
RHH5272_R3644
39.9
Terminal effector memory CD8 T-cell nTPM: 30.6
Samples: 4
Max nTPM: 41.3
Min nTPM: 15.8
RHH5232_R3604
40.8
RHH5204_R3575
41.3
RHH5261_R3633
15.8
RHH5296_R3662
24.5
Vd2 gdTCR nTPM: 163.3
Samples: 4
Max nTPM: 194.5
Min nTPM: 123.5
RHH5234_R3606
190.9
RHH5206_R3577
123.5
RHH5263_R3635
144.1
RHH5298_R3664
194.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
