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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
47.7
nTPM
Monaco:
236.7
nTPM
Schmiedel:
96.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.7
HPA sample
nTPM
gdT-cell nTPM: 41.9
Samples: 6
Max nTPM: 49.2
Min nTPM: 33.5
P10809_1007
33.5
P10809_1022
49.2
P10809_1041
47.7
P10809_1060
40.3
P10809_1077
37.6
P10809_1098
43.2
MAIT T-cell nTPM: 37.0
Samples: 6
Max nTPM: 51.8
Min nTPM: 21.0
P10809_1006
48.0
P10809_1024
51.8
P10809_1043
39.2
P10809_1062
31.9
P10809_1083
30.2
P10809_1097
21.0
Memory CD4 T-cell nTPM: 32.6
Samples: 6
Max nTPM: 37.9
Min nTPM: 28.7
P10809_1014
37.9
P10809_1026
32.6
P10809_1045
34.9
P10809_1064
30.6
P10809_1086
28.7
P10809_1113
30.6
Memory CD8 T-cell nTPM: 38.8
Samples: 5
Max nTPM: 47.7
Min nTPM: 32.8
P10809_1012
47.7
P10809_1027
32.8
P10809_1046
38.8
P10809_1065
32.9
P10809_1111
42.0
Naive CD4 T-cell nTPM: 23.5
Samples: 6
Max nTPM: 26.8
Min nTPM: 18.3
P10809_1015
26.8
P10809_1030
21.9
P10809_1049
22.7
P10809_1068
25.4
P10809_1085
18.3
P10809_1112
26.0
Naive CD8 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 33.0
Min nTPM: 23.0
P10809_1016
27.9
P10809_1031
26.4
P10809_1050
30.2
P10809_1069
26.7
P10809_1087
33.0
P10809_1110
23.0
T-reg nTPM: 47.7
Samples: 6
Max nTPM: 70.6
Min nTPM: 31.8
P10809_1018
70.6
P10809_1037
44.0
P10809_1056
31.8
P10809_1075
41.5
P10809_1094
57.0
P10809_1106
41.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 210.9
Samples: 4
Max nTPM: 234.8
Min nTPM: 170.2
RHH5202_R3573
170.2
RHH5230_R3602
211.6
RHH5259_R3631
234.8
RHH5288_R3660
227.1
Effector memory CD8 T-cell nTPM: 232.0
Samples: 4
Max nTPM: 276.8
Min nTPM: 207.6
RHH5203_R3574
216.9
RHH5231_R3603
207.6
RHH5260_R3632
276.8
RHH5289_R3661
226.6
MAIT T-cell nTPM: 186.7
Samples: 4
Max nTPM: 238.9
Min nTPM: 132.0
RHH5233_R3605
190.0
RHH5205_R3576
238.9
RHH5262_R3634
185.7
RHH5297_R3663
132.0
Memory CD4 T-cell TFH nTPM: 195.0
Samples: 4
Max nTPM: 206.6
Min nTPM: 179.5
RHH5300_R3666
193.5
RHH5236_R3608
200.3
RHH5265_R3637
206.6
RHH5208_R3579
179.5
Memory CD4 T-cell Th1 nTPM: 201.5
Samples: 4
Max nTPM: 267.3
Min nTPM: 150.2
RHH5210_R3581
150.2
RHH5302_R3668
157.6
RHH5238_R3610
267.3
RHH5267_R3639
231.0
Memory CD4 T-cell Th1/Th17 nTPM: 209.8
Samples: 4
Max nTPM: 248.2
Min nTPM: 169.2
RHH5303_R3669
169.2
RHH5211_R3582
220.1
RHH5239_R3611
248.2
RHH5268_R3640
201.8
Memory CD4 T-cell Th17 nTPM: 216.0
Samples: 4
Max nTPM: 227.5
Min nTPM: 206.6
RHH5304_R3670
206.6
RHH5212_R3583
207.1
RHH5240_R3612
227.5
RHH5269_R3641
222.8
Memory CD4 T-cell Th2 nTPM: 195.3
Samples: 4
Max nTPM: 232.4
Min nTPM: 134.7
RHH5305_R3671
199.0
RHH5213_R3584
232.4
RHH5241_R3613
134.7
RHH5270_R3642
215.2
Naive CD4 T-cell nTPM: 163.1
Samples: 4
Max nTPM: 183.8
Min nTPM: 127.9
RHH5306_R3672
177.8
RHH5214_R3585
163.0
RHH5242_R3614
127.9
RHH5271_R3643
183.8
Naive CD8 T-cell nTPM: 137.1
Samples: 4
Max nTPM: 156.2
Min nTPM: 120.9
RHH5201_R3572
120.9
RHH5229_R3601
126.8
RHH5258_R3630
144.4
RHH5287_R3659
156.2
Non-Vd2 gdTCR nTPM: 208.3
Samples: 4
Max nTPM: 216.4
Min nTPM: 196.6
RHH5235_R3607
196.6
RHH5264_R3636
214.8
RHH5207_R3578
216.4
RHH5299_R3665
205.3
T-reg nTPM: 203.3
Samples: 4
Max nTPM: 218.6
Min nTPM: 174.7
RHH5301_R3667
218.6
RHH5237_R3609
174.7
RHH5266_R3638
213.1
RHH5209_R3580
206.8
Terminal effector memory CD4 T-cell nTPM: 236.7
Samples: 2
Max nTPM: 238.7
Min nTPM: 234.7
RHH5243_R3615
238.7
RHH5272_R3644
234.7
Terminal effector memory CD8 T-cell nTPM: 209.9
Samples: 4
Max nTPM: 230.1
Min nTPM: 191.9
RHH5232_R3604
208.7
RHH5204_R3575
191.9
RHH5261_R3633
230.1
RHH5296_R3662
209.0
Vd2 gdTCR nTPM: 171.0
Samples: 4
Max nTPM: 189.9
Min nTPM: 149.7
RHH5234_R3606
149.7
RHH5206_R3577
172.4
RHH5263_R3635
189.9
RHH5298_R3664
171.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
