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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
241.8
nTPM
Monaco:
1325.7
nTPM
Schmiedel:
137.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
241.8
HPA sample
nTPM
gdT-cell nTPM: 228.7
Samples: 6
Max nTPM: 348.7
Min nTPM: 147.5
P10809_1007
230.3
P10809_1022
147.5
P10809_1041
174.7
P10809_1060
189.4
P10809_1077
281.3
P10809_1098
348.7
MAIT T-cell nTPM: 135.3
Samples: 6
Max nTPM: 157.4
Min nTPM: 109.9
P10809_1006
157.4
P10809_1024
109.9
P10809_1043
120.8
P10809_1062
146.5
P10809_1083
145.7
P10809_1097
131.6
Memory CD4 T-cell nTPM: 187.4
Samples: 6
Max nTPM: 253.3
Min nTPM: 89.4
P10809_1014
223.5
P10809_1026
115.7
P10809_1045
89.4
P10809_1064
210.6
P10809_1086
253.3
P10809_1113
231.8
Memory CD8 T-cell nTPM: 196.4
Samples: 5
Max nTPM: 287.3
Min nTPM: 99.0
P10809_1012
212.8
P10809_1027
172.1
P10809_1046
99.0
P10809_1065
287.3
P10809_1111
211.0
Naive CD4 T-cell nTPM: 192.7
Samples: 6
Max nTPM: 298.8
Min nTPM: 69.5
P10809_1015
298.8
P10809_1030
139.0
P10809_1049
69.5
P10809_1068
177.5
P10809_1085
224.1
P10809_1112
247.3
Naive CD8 T-cell nTPM: 241.8
Samples: 6
Max nTPM: 424.1
Min nTPM: 122.6
P10809_1016
248.8
P10809_1031
173.4
P10809_1050
122.6
P10809_1069
257.8
P10809_1087
424.1
P10809_1110
223.9
T-reg nTPM: 200.1
Samples: 6
Max nTPM: 316.0
Min nTPM: 144.4
P10809_1018
316.0
P10809_1037
144.4
P10809_1056
155.2
P10809_1075
189.0
P10809_1094
224.2
P10809_1106
172.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1325.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 764.4
Samples: 4
Max nTPM: 996.8
Min nTPM: 570.0
RHH5202_R3573
996.8
RHH5230_R3602
658.9
RHH5259_R3631
570.0
RHH5288_R3660
831.7
Effector memory CD8 T-cell nTPM: 1325.6
Samples: 4
Max nTPM: 1488.3
Min nTPM: 1168.9
RHH5203_R3574
1367.0
RHH5231_R3603
1488.3
RHH5260_R3632
1168.9
RHH5289_R3661
1278.3
MAIT T-cell nTPM: 714.3
Samples: 4
Max nTPM: 804.7
Min nTPM: 621.4
RHH5233_R3605
804.7
RHH5205_R3576
739.0
RHH5262_R3634
691.9
RHH5297_R3663
621.4
Memory CD4 T-cell TFH nTPM: 812.6
Samples: 4
Max nTPM: 1039.2
Min nTPM: 665.7
RHH5300_R3666
665.7
RHH5236_R3608
798.3
RHH5265_R3637
747.0
RHH5208_R3579
1039.2
Memory CD4 T-cell Th1 nTPM: 705.2
Samples: 4
Max nTPM: 801.4
Min nTPM: 570.5
RHH5210_R3581
724.2
RHH5302_R3668
801.4
RHH5238_R3610
570.5
RHH5267_R3639
724.8
Memory CD4 T-cell Th1/Th17 nTPM: 743.8
Samples: 4
Max nTPM: 925.5
Min nTPM: 512.7
RHH5303_R3669
909.2
RHH5211_R3582
925.5
RHH5239_R3611
512.7
RHH5268_R3640
627.7
Memory CD4 T-cell Th17 nTPM: 809.0
Samples: 4
Max nTPM: 963.0
Min nTPM: 658.1
RHH5304_R3670
836.1
RHH5212_R3583
778.6
RHH5240_R3612
963.0
RHH5269_R3641
658.1
Memory CD4 T-cell Th2 nTPM: 754.9
Samples: 4
Max nTPM: 820.6
Min nTPM: 721.8
RHH5305_R3671
820.6
RHH5213_R3584
732.0
RHH5241_R3613
745.0
RHH5270_R3642
721.8
Naive CD4 T-cell nTPM: 812.4
Samples: 4
Max nTPM: 878.1
Min nTPM: 757.9
RHH5306_R3672
844.0
RHH5214_R3585
769.7
RHH5242_R3614
757.9
RHH5271_R3643
878.1
Naive CD8 T-cell nTPM: 751.5
Samples: 4
Max nTPM: 951.5
Min nTPM: 596.0
RHH5201_R3572
951.5
RHH5229_R3601
596.0
RHH5258_R3630
667.8
RHH5287_R3659
790.6
Non-Vd2 gdTCR nTPM: 1191.3
Samples: 4
Max nTPM: 1478.3
Min nTPM: 900.2
RHH5235_R3607
900.2
RHH5264_R3636
1478.3
RHH5207_R3578
1447.2
RHH5299_R3665
939.6
T-reg nTPM: 741.7
Samples: 4
Max nTPM: 794.2
Min nTPM: 701.3
RHH5301_R3667
720.5
RHH5237_R3609
794.2
RHH5266_R3638
701.3
RHH5209_R3580
750.7
Terminal effector memory CD4 T-cell nTPM: 950.5
Samples: 2
Max nTPM: 1054.8
Min nTPM: 846.1
RHH5243_R3615
846.1
RHH5272_R3644
1054.8
Terminal effector memory CD8 T-cell nTPM: 1214.4
Samples: 4
Max nTPM: 1315.5
Min nTPM: 1134.9
RHH5232_R3604
1199.1
RHH5204_R3575
1315.5
RHH5261_R3633
1134.9
RHH5296_R3662
1208.1
Vd2 gdTCR nTPM: 1115.0
Samples: 4
Max nTPM: 1760.1
Min nTPM: 719.4
RHH5234_R3606
893.6
RHH5206_R3577
1760.1
RHH5263_R3635
1086.9
RHH5298_R3664
719.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.