HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:572.1 nTPM
HPA Brain:337.0 nTPM
GTEx:572.1 nTPM
FANTOM5:498.5 Scaled Tags Per Million
Pig:2360.4 nTPM
Mouse:204.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006462Antibody CAB002599
Glial cells HighMedium
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 337.0
Sample id Sample description nTPM
Hippocampus
nTPM: 337.0
2529 Female, age 94, left hemisphere 368.9
1855 Male, age 76, left hemisphere 364.6
2148 Female, age 91, left hemisphere 345.7
1911 Female, age 85, right hemisphere 342.5
1898 Male, age 80, left hemisphere 314.4
2621 Female, age 67, right hemisphere 285.7
Dentate gyrus
nTPM: 238.5
2246 Female, age 85, both hemispheres 324.2
2010 Male, age 76, both hemispheres 311.5
2530 Female, age 94, left hemisphere 236.6
1927 Female, age 91, both hemispheres 203.1
2528 Male, age 74, both hemispheres 202.0
2531 Female, age 67, both hemispheres 153.8
Entorhinal gyrus
nTPM: 272.2
1938 Female, age 85, left hemisphere 350.1
2117 Female, age 91, right hemisphere 328.9
1787 Male, age 76, left hemisphere 298.0
2764 Male, age 80, right hemisphere 252.9
2686 Male, age 75, right hemisphere 228.6
2613 Female, age 94, left hemisphere 174.9
Hippocampus, CA1
nTPM: 306.2
2527 Male, age 74, both hemispheres 419.7
2082 Female, age 91, right hemisphere 286.6
1873 Female, age 85, both hemispheres 278.6
2045 Male, age 76, both hemispheres 273.8
2749 Male, age 80, left hemisphere 272.4
Hippocampus, CA2
nTPM: 268.5
2249 Male, age 74, both hemispheres 332.4
1940 Female, age 85, left hemisphere 306.2
2113 Female, age 91, right hemisphere 304.2
1963 Male, age 80, left hemisphere 235.4
2437 Female, age 94, left hemisphere 234.2
1892 Male, age 76, both hemispheres 198.9
Hippocampus, CA3
nTPM: 221.8
2137 Male, age 80, left hemisphere 263.6
1891 Female, age 85, both hemispheres 246.5
1867 Male, age 76, both hemispheres 242.2
2436 Male, age 74, both hemispheres 226.9
2861 Female, age 67, both hemispheres 214.8
2620 Female, age 94, left hemisphere 136.9
Parahippocampal cortex
nTPM: 318.1
2622 Female, age 67, right hemisphere 378.1
2692 Male, age 74, both hemispheres 358.5
1933 Female, age 85, both hemispheres 356.4
2018 Male, age 76, both hemispheres 354.3
2245 Female, age 91, both hemispheres 347.4
2250 Female, age 67, right hemisphere 342.8
2693 Female, age 94, both hemispheres 275.3
2532 Female, age 72, left hemisphere 269.4
1850 Male, age 80, both hemispheres 252.6
1990 Female, age 91, right hemisphere 246.0
Perirhinal gyrus
nTPM: 261.0
1794 Male, age 80, right hemisphere 296.6
1841 Female, age 85, right hemisphere 276.7
2521 Female, age 94, right hemisphere 266.4
1847 Female, age 91, left hemisphere 253.5
2848 Male, age 76, right hemisphere 212.1
Subiculum
nTPM: 322.7
2619 Male, age 74, both hemispheres 431.8
2042 Male, age 76, both hemispheres 333.7
2438 Female, age 94, left hemisphere 333.1
2729 Female, age 91, right hemisphere 327.0
1977 Female, age 85, both hemispheres 270.0
1901 Male, age 80, both hemispheres 240.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 572.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 572.1
Samples: 197

Max nTPM: 1396.7
Min nTPM: 164.1
Std nTPM: 251.7
Median nTPM: 522.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1396.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1220.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1186.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1178.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1151.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 1133.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1130.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1126.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1110.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1093.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1078.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 498.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 498.5
FF:10153-102I9 76 years, female 540.0
FF:10169-103B7 60 years, female 456.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2360.4
Pig sample Sample description nTPM
Subiculum
nTPM: 2042.5
Samples: 4

Max nTPM: 2571.5
Min nTPM: 1572.5
Sample A Female 2571.5
Sample B Female 2054.6
Sample C Male 1971.5
Sample D Male 1572.5
Dorsal hippocampus
nTPM: 2285.1
Samples: 4

Max nTPM: 3100.9
Min nTPM: 1241.7
Sample A Female 3100.9
Sample B Female 1950.1
Sample C Male 2847.8
Sample D Male 1241.7
Entorhinal cortex
nTPM: 1914.5
Samples: 4

Max nTPM: 2442.0
Min nTPM: 1462.3
Sample A Female 1519.0
Sample B Female 2234.5
Sample C Male 2442.0
Sample D Male 1462.3
Ventral hippocampus
nTPM: 2360.4
Samples: 4

Max nTPM: 2942.4
Min nTPM: 2024.9
Sample A Female 2378.5
Sample B Female 2095.9
Sample C Male 2942.4
Sample D Male 2024.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 204.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.2
Samples: 4

Max nTPM: 214.8
Min nTPM: 193.6
Sample A Male 214.8
Sample B Male 195.2
Sample C Female 213.2
Sample D Female 193.6
Hippocampal formation
nTPM: 182.5
Samples: 4

Max nTPM: 209.5
Min nTPM: 164.2
Sample A Male 209.5
Sample B Male 164.2
Sample C Female 170.2
Sample D Female 186.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.6

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