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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
504.4
nTPM
FANTOM5:
787.8
Scaled Tags Per Million
Pig:
4285.1
nTPM
Allen mouse:
0.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
504.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 497.1
2301
Female, age 85, both hemispheres
895.0
2188
Female, age 91, both hemispheres
413.3
2090
Male, age 80, both hemispheres
407.7
1984
Male, age 76, both hemispheres
272.3
Dorsal cochlear nucleus nTPM: 395.3
2187
Female, age 91, both hemispheres
480.0
2802
Male, age 74, right hemisphere
429.3
2058
Male, age 76, both hemispheres
383.7
2370
Male, age 61, both hemispheres
375.3
2378
Male, age 80, both hemispheres
308.3
Dorsal tegmental nucleus nTPM: 453.9
2083
Male, age 80, both hemispheres
553.7
2326
Male, age 74, both hemispheres
439.7
1936
Male, age 76, left hemisphere
433.5
2358
Male, age 61, both hemispheres
388.5
Dorsolateral tegmental area nTPM: 450.0
2751
Female, age 85, both hemispheres
657.4
2654
Male, age 80, both hemispheres
541.7
2337
Male, age 61, both hemispheres
406.5
2141
Male, age 76, both hemispheres
355.7
2360
Male, age 74, both hemispheres
288.7
Kolliker-Fuse nucleus nTPM: 492.2
2315
Male, age 76, right hemisphere
558.2
2793
Female, age 91, left hemisphere
472.0
2163
Male, age 80, both hemispheres
446.5
Lateral lemniscal nuclei nTPM: 329.2
2746
Female, age 85, left hemisphere
427.8
2320
Female, age 91, left hemisphere
331.7
2169
Male, age 76, both hemispheres
322.6
2453
Male, age 74, right hemisphere
283.5
2036
Male, age 80, both hemispheres
280.4
Lateral parabrachial nucleus nTPM: 426.6
2792
Male, age 76, both hemispheres
583.4
2013
Male, age 80, both hemispheres
450.0
2139
Female, age 85, right hemisphere
406.3
2790
Male, age 61, both hemispheres
266.8
Lateral vestibular nucleus nTPM: 504.4
2311
Male, age 80, both hemispheres
602.2
2184
Male, age 76, both hemispheres
406.6
Locus coeruleus nTPM: 325.8
2317
Female, age 72, unknown
360.4
2720
Male, age 74, both hemispheres
355.8
2162
Male, age 80, both hemispheres
333.3
2123
Female, age 91, both hemispheres
330.2
2014
Male, age 55, unknown
312.1
1980
Male, age 76, both hemispheres
310.9
2788
Male, age 74, unknown
277.8
Medial parabrachial nucleus nTPM: 487.6
2170
Female, age 91, both hemispheres
659.0
2463
Female, age 85, right hemisphere
483.2
2854
Male, age 80, both hemispheres
472.0
2786
Male, age 76, both hemispheres
439.3
2156
Male, age 61, both hemispheres
384.5
Medial periolivary nuclei nTPM: 325.9
2081
Male, age 80, both hemispheres
381.3
2791
Male, age 74, right hemisphere
366.5
2063
Male, age 76, both hemispheres
309.0
2458
Female, age 91, both hemispheres
301.6
2171
Female, age 85, both hemispheres
271.0
Motor facial nucleus nTPM: 355.5
2126
Male, age 61, both hemispheres
432.1
2697
Female, age 85, both hemispheres
409.4
2365
Male, age 74, right hemisphere
382.3
2795
Female, age 91, both hemispheres
355.4
2062
Male, age 76, both hemispheres
317.5
2327
Male, age 80, both hemispheres
236.4
Motor trigeminal nucleus nTPM: 389.8
2309
Male, age 76, both hemispheres
474.9
2335
Male, age 61, both hemispheres
458.6
2321
Female, age 91, both hemispheres
371.6
2560
Male, age 74, both hemispheres
331.1
2079
Male, age 80, both hemispheres
312.8
Nuclei of the trapezoid body nTPM: 314.3
1983
Male, age 76, both hemispheres
341.9
2166
Male, age 80, both hemispheres
341.6
2159
Male, age 61, both hemispheres
340.6
2368
Female, age 91, both hemispheres
326.1
2735
Female, age 85, both hemispheres
221.0
Nucleus raphe magnus nTPM: 274.7
2051
Male, age 76, both hemispheres
377.2
2455
Male, age 74, both hemispheres
346.6
2328
Male, age 80, both hemispheres
322.2
2459
Female, age 91, both hemispheres
258.6
2160
Male, age 61, both hemispheres
194.8
2172
Female, age 85, both hemispheres
148.6
Paramedian reticular nucleus nTPM: 375.7
2052
Male, age 76, both hemispheres
416.6
2057
Male, age 80, both hemispheres
377.2
2050
Female, age 85, both hemispheres
368.9
2313
Male, age 61, both hemispheres
340.2
Pedunculopontine tegmental nucleus nTPM: 405.5
2334
Male, age 80, both hemispheres
511.8
1921
Female, age 85, both hemispheres
356.0
2338
Male, age 61, both hemispheres
348.7
Pontine nuclei nTPM: 343.6
2319
Female, age 91, both hemispheres
414.5
2115
Male, age 80, left hemisphere
411.2
2109
Female, age 72, unknown
401.3
1863
Male, age 55, unknown
382.1
2454
Male, age 74, left hemisphere
381.1
1968
Male, age 76, left hemisphere
313.1
2787
Female, age 85, both hemispheres
243.9
2727
Male, age 61, right hemisphere
201.8
Pontine raphe nucleus nTPM: 339.0
2853
Male, age 76, midline
394.2
2122
Female, age 85, midline
283.9
Posteroventral cochlear nucleus nTPM: 444.2
2341
Male, age 80, both hemispheres
643.3
2135
Female, age 91, both hemispheres
461.4
2371
Male, age 61, both hemispheres
381.4
2070
Male, age 76, both hemispheres
374.7
2752
Female, age 85, both hemispheres
360.3
Principal sensory trigeminal nucleus nTPM: 356.1
2324
Male, age 76, both hemispheres
518.0
2367
Female, age 91, left hemisphere
392.7
2158
Male, age 61, both hemispheres
263.2
2008
Male, age 80, left hemisphere
250.6
Reticular pontine nucleus, caudal nTPM: 335.1
2559
Male, age 74, both hemispheres
408.4
2092
Male, age 76, both hemispheres
395.3
2457
Female, age 91, both hemispheres
286.7
2332
Male, age 80, right hemisphere
249.9
Reticular pontine nucleus, oral nTPM: 419.9
1939
Male, age 80, both hemispheres
495.7
2167
Male, age 76, both hemispheres
430.0
2012
Female, age 85, both hemispheres
425.3
2361
Male, age 74, both hemispheres
406.5
2366
Female, age 91, both hemispheres
342.1
Reticulotegmental nucleus nTPM: 407.8
2322
Female, age 91, both hemispheres
440.2
2333
Male, age 80, both hemispheres
438.3
2325
Male, age 76, both hemispheres
399.8
2452
Male, age 74, both hemispheres
353.1
Spinal trigeminal nucleus, oral nTPM: 345.9
2164
Male, age 80, both hemispheres
387.0
1978
Male, age 76, both hemispheres
334.2
2737
Female, age 85, both hemispheres
316.5
Subcoeruleus area nTPM: 440.2
2369
Female, age 85, left hemisphere
689.3
1958
Male, age 80, both hemispheres
441.5
2451
Male, age 74, both hemispheres
380.7
2323
Female, age 91, left hemisphere
370.2
2089
Male, age 76, left hemisphere
319.5
Superior olive nTPM: 345.5
2020
Male, age 76, both hemispheres
392.6
2364
Male, age 74, right hemisphere
376.1
2329
Male, age 80, right hemisphere
371.4
2561
Female, age 91, both hemispheres
317.7
1875
Female, age 85, both hemispheres
269.5
Ventral periolivary nuclei nTPM: 341.7
2023
Male, age 76, both hemispheres
450.1
2165
Male, age 80, both hemispheres
334.8
2130
Female, age 85, both hemispheres
294.7
2794
Female, age 91, left hemisphere
287.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 344.7
2840
Female, age 85, both hemispheres
469.5
1959
Male, age 76, both hemispheres
342.8
2161
Male, age 80, both hemispheres
338.0
2449
Male, age 74, both hemispheres
315.0
2456
Female, age 91, both hemispheres
309.0
2359
Male, age 61, both hemispheres
293.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
4285.1
Pig sample
Sample description
nTPM
Pons nTPM: 4285.2
Samples: 4
Max nTPM: 5368.8
Min nTPM: 3128.1
Sample A
Female
3296.1
Sample B
Female
3128.1
Sample C
Male
5368.8
Sample D
Male
5347.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
