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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.0
nTPM
Monaco:
128.9
nTPM
Schmiedel:
56.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.0
HPA sample
nTPM
gdT-cell nTPM: 34.6
Samples: 6
Max nTPM: 50.1
Min nTPM: 21.9
P10809_1007
21.9
P10809_1022
41.0
P10809_1041
29.6
P10809_1060
50.1
P10809_1077
26.3
P10809_1098
38.6
MAIT T-cell nTPM: 39.0
Samples: 6
Max nTPM: 47.8
Min nTPM: 28.1
P10809_1006
34.0
P10809_1024
47.8
P10809_1043
44.2
P10809_1062
36.3
P10809_1083
28.1
P10809_1097
43.4
Memory CD4 T-cell nTPM: 32.0
Samples: 6
Max nTPM: 35.5
Min nTPM: 25.3
P10809_1014
25.3
P10809_1026
34.7
P10809_1045
33.7
P10809_1064
29.0
P10809_1086
33.9
P10809_1113
35.5
Memory CD8 T-cell nTPM: 33.8
Samples: 5
Max nTPM: 47.7
Min nTPM: 22.7
P10809_1012
22.7
P10809_1027
47.7
P10809_1046
37.1
P10809_1065
34.9
P10809_1111
26.8
Naive CD4 T-cell nTPM: 29.2
Samples: 6
Max nTPM: 36.4
Min nTPM: 16.8
P10809_1015
16.8
P10809_1030
31.1
P10809_1049
34.3
P10809_1068
27.6
P10809_1085
36.4
P10809_1112
28.9
Naive CD8 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 35.8
Min nTPM: 19.7
P10809_1016
19.7
P10809_1031
27.8
P10809_1050
29.9
P10809_1069
35.8
P10809_1087
32.0
P10809_1110
28.3
T-reg nTPM: 38.0
Samples: 6
Max nTPM: 54.0
Min nTPM: 28.6
P10809_1018
33.1
P10809_1037
35.4
P10809_1056
54.0
P10809_1075
36.6
P10809_1094
28.6
P10809_1106
40.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
128.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.9
Samples: 4
Max nTPM: 128.7
Min nTPM: 75.9
RHH5202_R3573
85.3
RHH5230_R3602
85.5
RHH5259_R3631
75.9
RHH5288_R3660
128.7
Effector memory CD8 T-cell nTPM: 126.2
Samples: 4
Max nTPM: 132.2
Min nTPM: 116.6
RHH5203_R3574
116.6
RHH5231_R3603
132.2
RHH5260_R3632
125.4
RHH5289_R3661
130.6
MAIT T-cell nTPM: 129.0
Samples: 4
Max nTPM: 160.3
Min nTPM: 109.6
RHH5233_R3605
160.3
RHH5205_R3576
123.7
RHH5262_R3634
109.6
RHH5297_R3663
122.2
Memory CD4 T-cell TFH nTPM: 110.7
Samples: 4
Max nTPM: 125.1
Min nTPM: 100.5
RHH5300_R3666
100.5
RHH5236_R3608
103.9
RHH5265_R3637
113.3
RHH5208_R3579
125.1
Memory CD4 T-cell Th1 nTPM: 90.7
Samples: 4
Max nTPM: 121.3
Min nTPM: 57.7
RHH5210_R3581
93.2
RHH5302_R3668
90.6
RHH5238_R3610
57.7
RHH5267_R3639
121.3
Memory CD4 T-cell Th1/Th17 nTPM: 109.4
Samples: 4
Max nTPM: 148.7
Min nTPM: 68.2
RHH5303_R3669
148.7
RHH5211_R3582
109.2
RHH5239_R3611
68.2
RHH5268_R3640
111.6
Memory CD4 T-cell Th17 nTPM: 115.6
Samples: 4
Max nTPM: 136.5
Min nTPM: 95.5
RHH5304_R3670
130.5
RHH5212_R3583
95.5
RHH5240_R3612
136.5
RHH5269_R3641
100.0
Memory CD4 T-cell Th2 nTPM: 118.3
Samples: 4
Max nTPM: 129.9
Min nTPM: 93.8
RHH5305_R3671
122.5
RHH5213_R3584
129.9
RHH5241_R3613
127.1
RHH5270_R3642
93.8
Naive CD4 T-cell nTPM: 93.1
Samples: 4
Max nTPM: 108.4
Min nTPM: 75.0
RHH5306_R3672
108.4
RHH5214_R3585
96.2
RHH5242_R3614
75.0
RHH5271_R3643
92.8
Naive CD8 T-cell nTPM: 92.0
Samples: 4
Max nTPM: 111.5
Min nTPM: 64.3
RHH5201_R3572
109.6
RHH5229_R3601
64.3
RHH5258_R3630
111.5
RHH5287_R3659
82.7
Non-Vd2 gdTCR nTPM: 103.2
Samples: 4
Max nTPM: 116.1
Min nTPM: 95.9
RHH5235_R3607
95.9
RHH5264_R3636
102.7
RHH5207_R3578
97.9
RHH5299_R3665
116.1
T-reg nTPM: 87.8
Samples: 4
Max nTPM: 99.6
Min nTPM: 59.0
RHH5301_R3667
95.3
RHH5237_R3609
99.6
RHH5266_R3638
59.0
RHH5209_R3580
97.1
Terminal effector memory CD4 T-cell nTPM: 113.7
Samples: 2
Max nTPM: 116.4
Min nTPM: 111.0
RHH5243_R3615
116.4
RHH5272_R3644
111.0
Terminal effector memory CD8 T-cell nTPM: 107.2
Samples: 4
Max nTPM: 131.2
Min nTPM: 97.1
RHH5232_R3604
102.9
RHH5204_R3575
97.1
RHH5261_R3633
97.5
RHH5296_R3662
131.2
Vd2 gdTCR nTPM: 118.0
Samples: 4
Max nTPM: 129.8
Min nTPM: 106.2
RHH5234_R3606
129.8
RHH5206_R3577
121.5
RHH5263_R3635
106.2
RHH5298_R3664
114.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
