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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.5
nTPM
Monaco:
82.8
nTPM
Schmiedel:
194.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.5
HPA sample
nTPM
gdT-cell nTPM: 0.8
Samples: 6
Max nTPM: 1.7
Min nTPM: 0.3
P10809_1007
0.4
P10809_1022
1.2
P10809_1041
1.7
P10809_1060
0.4
P10809_1077
0.5
P10809_1098
0.3
MAIT T-cell nTPM: 1.7
Samples: 6
Max nTPM: 2.9
Min nTPM: 0.6
P10809_1006
1.5
P10809_1024
2.9
P10809_1043
0.6
P10809_1062
2.9
P10809_1083
0.8
P10809_1097
1.4
Memory CD4 T-cell nTPM: 15.5
Samples: 6
Max nTPM: 24.6
Min nTPM: 9.6
P10809_1014
13.0
P10809_1026
15.6
P10809_1045
18.4
P10809_1064
12.0
P10809_1086
9.6
P10809_1113
24.6
Memory CD8 T-cell nTPM: 1.7
Samples: 5
Max nTPM: 3.9
Min nTPM: 0.5
P10809_1012
3.9
P10809_1027
1.0
P10809_1046
1.6
P10809_1065
0.5
P10809_1111
1.6
Naive CD4 T-cell nTPM: 15.2
Samples: 6
Max nTPM: 18.3
Min nTPM: 10.8
P10809_1015
10.8
P10809_1030
16.7
P10809_1049
14.1
P10809_1068
14.4
P10809_1085
18.3
P10809_1112
16.6
Naive CD8 T-cell nTPM: 5.5
Samples: 6
Max nTPM: 10.6
Min nTPM: 0.6
P10809_1016
5.3
P10809_1031
10.6
P10809_1050
6.1
P10809_1069
3.2
P10809_1087
0.6
P10809_1110
7.4
T-reg nTPM: 21.5
Samples: 6
Max nTPM: 30.3
Min nTPM: 11.5
P10809_1018
15.1
P10809_1037
11.5
P10809_1056
21.9
P10809_1075
23.4
P10809_1094
30.3
P10809_1106
26.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.1
Samples: 4
Max nTPM: 28.9
Min nTPM: 17.4
RHH5202_R3573
17.4
RHH5230_R3602
21.5
RHH5259_R3631
28.6
RHH5288_R3660
28.9
Effector memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 12.8
Min nTPM: 4.2
RHH5203_R3574
8.5
RHH5231_R3603
4.2
RHH5260_R3632
12.8
RHH5289_R3661
11.3
MAIT T-cell nTPM: 6.1
Samples: 4
Max nTPM: 8.3
Min nTPM: 3.3
RHH5233_R3605
3.3
RHH5205_R3576
5.2
RHH5262_R3634
7.5
RHH5297_R3663
8.3
Memory CD4 T-cell TFH nTPM: 82.8
Samples: 4
Max nTPM: 95.1
Min nTPM: 73.3
RHH5300_R3666
80.2
RHH5236_R3608
95.1
RHH5265_R3637
82.4
RHH5208_R3579
73.3
Memory CD4 T-cell Th1 nTPM: 61.6
Samples: 4
Max nTPM: 80.0
Min nTPM: 44.1
RHH5210_R3581
44.2
RHH5302_R3668
44.1
RHH5238_R3610
78.1
RHH5267_R3639
80.0
Memory CD4 T-cell Th1/Th17 nTPM: 44.6
Samples: 4
Max nTPM: 65.6
Min nTPM: 32.3
RHH5303_R3669
40.0
RHH5211_R3582
32.3
RHH5239_R3611
40.3
RHH5268_R3640
65.6
Memory CD4 T-cell Th17 nTPM: 74.4
Samples: 4
Max nTPM: 116.7
Min nTPM: 43.9
RHH5304_R3670
43.9
RHH5212_R3583
65.8
RHH5240_R3612
71.2
RHH5269_R3641
116.7
Memory CD4 T-cell Th2 nTPM: 73.4
Samples: 4
Max nTPM: 100.0
Min nTPM: 61.6
RHH5305_R3671
61.6
RHH5213_R3584
61.9
RHH5241_R3613
70.0
RHH5270_R3642
100.0
Naive CD4 T-cell nTPM: 52.0
Samples: 4
Max nTPM: 66.0
Min nTPM: 43.4
RHH5306_R3672
53.4
RHH5214_R3585
45.3
RHH5242_R3614
43.4
RHH5271_R3643
66.0
Naive CD8 T-cell nTPM: 33.8
Samples: 4
Max nTPM: 42.0
Min nTPM: 23.7
RHH5201_R3572
34.1
RHH5229_R3601
42.0
RHH5258_R3630
23.7
RHH5287_R3659
35.4
Non-Vd2 gdTCR nTPM: 6.2
Samples: 4
Max nTPM: 10.2
Min nTPM: 3.1
RHH5235_R3607
10.2
RHH5264_R3636
4.0
RHH5207_R3578
3.1
RHH5299_R3665
7.5
T-reg nTPM: 64.3
Samples: 4
Max nTPM: 81.8
Min nTPM: 51.5
RHH5301_R3667
57.2
RHH5237_R3609
66.6
RHH5266_R3638
81.8
RHH5209_R3580
51.5
Terminal effector memory CD4 T-cell nTPM: 10.0
Samples: 2
Max nTPM: 11.3
Min nTPM: 8.7
RHH5243_R3615
8.7
RHH5272_R3644
11.3
Terminal effector memory CD8 T-cell nTPM: 3.6
Samples: 4
Max nTPM: 6.2
Min nTPM: 2.0
RHH5232_R3604
2.7
RHH5204_R3575
2.0
RHH5261_R3633
3.3
RHH5296_R3662
6.2
Vd2 gdTCR nTPM: 6.4
Samples: 4
Max nTPM: 8.8
Min nTPM: 3.2
RHH5234_R3606
6.2
RHH5206_R3577
3.2
RHH5263_R3635
7.5
RHH5298_R3664
8.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
