HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:18.9 nTPM
HPA Brain:13.1 nTPM
GTEx:18.9 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:3.3 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028454Antibody HPA028465
Glial cells HighLow
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
2529 Female, age 94, left hemisphere 13.7
1855 Male, age 76, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.4
1911 Female, age 85, right hemisphere 12.1
2148 Female, age 91, left hemisphere 11.4
1898 Male, age 80, left hemisphere 10.0
Dentate gyrus
nTPM: 11.5
2530 Female, age 94, left hemisphere 13.8
2010 Male, age 76, both hemispheres 13.0
2531 Female, age 67, both hemispheres 11.7
2246 Female, age 85, both hemispheres 11.4
2528 Male, age 74, both hemispheres 10.8
1927 Female, age 91, both hemispheres 8.5
Entorhinal gyrus
nTPM: 11.6
2117 Female, age 91, right hemisphere 14.3
1787 Male, age 76, left hemisphere 11.6
2686 Male, age 75, right hemisphere 11.3
2764 Male, age 80, right hemisphere 11.3
2613 Female, age 94, left hemisphere 10.6
1938 Female, age 85, left hemisphere 10.4
Hippocampus, CA1
nTPM: 10.4
2527 Male, age 74, both hemispheres 11.5
2082 Female, age 91, right hemisphere 11.1
2045 Male, age 76, both hemispheres 10.6
1873 Female, age 85, both hemispheres 9.3
2749 Male, age 80, left hemisphere 9.3
Hippocampus, CA2
nTPM: 10.0
1940 Female, age 85, left hemisphere 11.8
2113 Female, age 91, right hemisphere 10.7
2437 Female, age 94, left hemisphere 10.2
2249 Male, age 74, both hemispheres 9.9
1892 Male, age 76, both hemispheres 8.8
1963 Male, age 80, left hemisphere 8.7
Hippocampus, CA3
nTPM: 10.8
1891 Female, age 85, both hemispheres 12.8
2620 Female, age 94, left hemisphere 12.1
2861 Female, age 67, both hemispheres 11.7
2436 Male, age 74, both hemispheres 10.3
1867 Male, age 76, both hemispheres 10.2
2137 Male, age 80, left hemisphere 7.9
Parahippocampal cortex
nTPM: 11.5
2532 Female, age 72, left hemisphere 15.3
2245 Female, age 91, both hemispheres 13.9
2692 Male, age 74, both hemispheres 13.9
2018 Male, age 76, both hemispheres 12.0
2622 Female, age 67, right hemisphere 10.7
1990 Female, age 91, right hemisphere 10.6
2693 Female, age 94, both hemispheres 10.5
1850 Male, age 80, both hemispheres 10.0
1933 Female, age 85, both hemispheres 9.5
2250 Female, age 67, right hemisphere 8.4
Perirhinal gyrus
nTPM: 9.5
1794 Male, age 80, right hemisphere 10.7
2521 Female, age 94, right hemisphere 10.5
2848 Male, age 76, right hemisphere 10.2
1847 Female, age 91, left hemisphere 8.4
1841 Female, age 85, right hemisphere 7.7
Subiculum
nTPM: 13.1
2042 Male, age 76, both hemispheres 17.4
2438 Female, age 94, left hemisphere 15.9
2619 Male, age 74, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.5
1977 Female, age 85, both hemispheres 10.5
2729 Female, age 91, right hemisphere 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 46.0
Min nTPM: 8.0
Std nTPM: 5.7
Median nTPM: 18.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 37.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 31.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 31.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 30.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 30.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 29.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.4
FF:10153-102I9 76 years, female 48.0
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Subiculum
nTPM: 12.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.6
Sample A Female 14.4
Sample B Female 10.6
Sample C Male 11.8
Sample D Male 12.8
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.2
Sample A Female 15.8
Sample B Female 12.1
Sample C Male 15.8
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.0
Sample A Female 12.1
Sample B Female 9.0
Sample C Male 12.0
Sample D Male 11.4
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 10.1
Sample A Female 12.4
Sample B Female 10.1
Sample C Male 17.7
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.1
Sample A Male 2.3
Sample B Male 2.9
Sample C Female 2.6
Sample D Female 2.1
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.3
Sample A Male 3.2
Sample B Male 2.3
Sample C Female 4.2
Sample D Female 3.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
67787327 Antisense, RP_040916_02_G04, Mouse strain C57BL/6J (56 days, male) 3.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org