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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.0
nTPM
Monaco:
97.1
nTPM
Schmiedel:
48.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.0
HPA sample
nTPM
gdT-cell nTPM: 89.3
Samples: 6
Max nTPM: 112.8
Min nTPM: 59.3
P10809_1007
59.3
P10809_1022
103.8
P10809_1041
112.8
P10809_1060
75.8
P10809_1077
90.6
P10809_1098
93.7
MAIT T-cell nTPM: 79.8
Samples: 6
Max nTPM: 99.8
Min nTPM: 56.1
P10809_1006
56.1
P10809_1024
85.4
P10809_1043
90.8
P10809_1062
65.8
P10809_1083
80.8
P10809_1097
99.8
Memory CD4 T-cell nTPM: 78.0
Samples: 6
Max nTPM: 89.0
Min nTPM: 54.4
P10809_1014
54.4
P10809_1026
88.6
P10809_1045
89.0
P10809_1064
75.3
P10809_1086
84.0
P10809_1113
76.4
Memory CD8 T-cell nTPM: 91.2
Samples: 5
Max nTPM: 111.3
Min nTPM: 62.7
P10809_1012
62.7
P10809_1027
99.7
P10809_1046
111.3
P10809_1065
101.9
P10809_1111
80.2
Naive CD4 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 117.1
Min nTPM: 38.7
P10809_1015
38.7
P10809_1030
67.6
P10809_1049
117.1
P10809_1068
61.9
P10809_1085
75.3
P10809_1112
60.1
Naive CD8 T-cell nTPM: 87.3
Samples: 6
Max nTPM: 121.2
Min nTPM: 48.4
P10809_1016
48.4
P10809_1031
121.2
P10809_1050
110.7
P10809_1069
89.4
P10809_1087
90.7
P10809_1110
63.5
T-reg nTPM: 114.1
Samples: 6
Max nTPM: 140.1
Min nTPM: 93.9
P10809_1018
93.9
P10809_1037
95.5
P10809_1056
140.1
P10809_1075
133.0
P10809_1094
97.3
P10809_1106
124.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 51.8
Samples: 4
Max nTPM: 71.2
Min nTPM: 35.0
RHH5202_R3573
60.9
RHH5230_R3602
40.1
RHH5259_R3631
35.0
RHH5288_R3660
71.2
Effector memory CD8 T-cell nTPM: 87.4
Samples: 4
Max nTPM: 116.5
Min nTPM: 61.5
RHH5203_R3574
100.2
RHH5231_R3603
116.5
RHH5260_R3632
61.5
RHH5289_R3661
71.2
MAIT T-cell nTPM: 75.2
Samples: 4
Max nTPM: 85.7
Min nTPM: 57.1
RHH5233_R3605
84.1
RHH5205_R3576
57.1
RHH5262_R3634
85.7
RHH5297_R3663
73.9
Memory CD4 T-cell TFH nTPM: 85.0
Samples: 4
Max nTPM: 124.5
Min nTPM: 62.9
RHH5300_R3666
65.4
RHH5236_R3608
124.5
RHH5265_R3637
62.9
RHH5208_R3579
87.3
Memory CD4 T-cell Th1 nTPM: 64.4
Samples: 4
Max nTPM: 110.9
Min nTPM: 40.9
RHH5210_R3581
60.7
RHH5302_R3668
110.9
RHH5238_R3610
40.9
RHH5267_R3639
44.9
Memory CD4 T-cell Th1/Th17 nTPM: 61.3
Samples: 4
Max nTPM: 112.8
Min nTPM: 18.5
RHH5303_R3669
112.8
RHH5211_R3582
64.4
RHH5239_R3611
18.5
RHH5268_R3640
49.5
Memory CD4 T-cell Th17 nTPM: 43.8
Samples: 4
Max nTPM: 58.1
Min nTPM: 28.7
RHH5304_R3670
55.5
RHH5212_R3583
58.1
RHH5240_R3612
28.7
RHH5269_R3641
32.8
Memory CD4 T-cell Th2 nTPM: 66.0
Samples: 4
Max nTPM: 83.3
Min nTPM: 53.1
RHH5305_R3671
62.1
RHH5213_R3584
65.5
RHH5241_R3613
83.3
RHH5270_R3642
53.1
Naive CD4 T-cell nTPM: 56.3
Samples: 4
Max nTPM: 74.1
Min nTPM: 36.9
RHH5306_R3672
57.9
RHH5214_R3585
74.1
RHH5242_R3614
56.4
RHH5271_R3643
36.9
Naive CD8 T-cell nTPM: 47.0
Samples: 4
Max nTPM: 68.1
Min nTPM: 13.6
RHH5201_R3572
68.1
RHH5229_R3601
13.6
RHH5258_R3630
60.0
RHH5287_R3659
46.3
Non-Vd2 gdTCR nTPM: 88.3
Samples: 4
Max nTPM: 111.7
Min nTPM: 50.8
RHH5235_R3607
50.8
RHH5264_R3636
101.8
RHH5207_R3578
88.7
RHH5299_R3665
111.7
T-reg nTPM: 72.1
Samples: 4
Max nTPM: 105.3
Min nTPM: 49.0
RHH5301_R3667
78.9
RHH5237_R3609
105.3
RHH5266_R3638
49.0
RHH5209_R3580
55.0
Terminal effector memory CD4 T-cell nTPM: 56.4
Samples: 2
Max nTPM: 58.5
Min nTPM: 54.3
RHH5243_R3615
58.5
RHH5272_R3644
54.3
Terminal effector memory CD8 T-cell nTPM: 97.2
Samples: 4
Max nTPM: 119.8
Min nTPM: 64.7
RHH5232_R3604
119.8
RHH5204_R3575
101.0
RHH5261_R3633
64.7
RHH5296_R3662
103.1
Vd2 gdTCR nTPM: 82.1
Samples: 4
Max nTPM: 113.4
Min nTPM: 54.1
RHH5234_R3606
75.6
RHH5206_R3577
113.4
RHH5263_R3635
54.1
RHH5298_R3664
85.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
