HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:40.2 nTPM
HPA Brain:35.1 nTPM
GTEx:40.2 nTPM
FANTOM5:40.8 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:20.1 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006660Antibody CAB004022
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
2529 Female, age 94, left hemisphere 35.2
1911 Female, age 85, right hemisphere 31.7
2621 Female, age 67, right hemisphere 30.0
1898 Male, age 80, left hemisphere 28.0
2148 Female, age 91, left hemisphere 27.0
1855 Male, age 76, left hemisphere 25.7
Dentate gyrus
nTPM: 30.4
2010 Male, age 76, both hemispheres 39.5
2530 Female, age 94, left hemisphere 38.7
2528 Male, age 74, both hemispheres 33.6
2531 Female, age 67, both hemispheres 26.2
2246 Female, age 85, both hemispheres 25.5
1927 Female, age 91, both hemispheres 19.1
Entorhinal gyrus
nTPM: 33.1
2117 Female, age 91, right hemisphere 47.8
2686 Male, age 75, right hemisphere 34.4
1787 Male, age 76, left hemisphere 33.1
2764 Male, age 80, right hemisphere 32.1
1938 Female, age 85, left hemisphere 28.1
2613 Female, age 94, left hemisphere 23.0
Hippocampus, CA1
nTPM: 26.8
2527 Male, age 74, both hemispheres 31.1
2082 Female, age 91, right hemisphere 30.7
1873 Female, age 85, both hemispheres 27.2
2749 Male, age 80, left hemisphere 24.4
2045 Male, age 76, both hemispheres 20.8
Hippocampus, CA2
nTPM: 32.0
2249 Male, age 74, both hemispheres 45.9
2437 Female, age 94, left hemisphere 32.5
1940 Female, age 85, left hemisphere 31.8
1963 Male, age 80, left hemisphere 31.3
2113 Female, age 91, right hemisphere 31.0
1892 Male, age 76, both hemispheres 19.4
Hippocampus, CA3
nTPM: 27.8
2436 Male, age 74, both hemispheres 44.3
1891 Female, age 85, both hemispheres 29.8
1867 Male, age 76, both hemispheres 27.8
2137 Male, age 80, left hemisphere 22.6
2861 Female, age 67, both hemispheres 22.2
2620 Female, age 94, left hemisphere 20.5
Parahippocampal cortex
nTPM: 26.3
2532 Female, age 72, left hemisphere 33.0
2692 Male, age 74, both hemispheres 31.6
2018 Male, age 76, both hemispheres 31.2
1990 Female, age 91, right hemisphere 30.5
1933 Female, age 85, both hemispheres 25.9
2245 Female, age 91, both hemispheres 25.5
2250 Female, age 67, right hemisphere 22.2
2693 Female, age 94, both hemispheres 21.2
1850 Male, age 80, both hemispheres 21.1
2622 Female, age 67, right hemisphere 20.3
Perirhinal gyrus
nTPM: 20.7
2521 Female, age 94, right hemisphere 23.7
1794 Male, age 80, right hemisphere 22.7
1847 Female, age 91, left hemisphere 20.6
1841 Female, age 85, right hemisphere 18.4
2848 Male, age 76, right hemisphere 18.1
Subiculum
nTPM: 35.1
2042 Male, age 76, both hemispheres 48.6
1901 Male, age 80, both hemispheres 35.1
2438 Female, age 94, left hemisphere 34.8
1977 Female, age 85, both hemispheres 32.3
2619 Male, age 74, both hemispheres 32.3
2729 Female, age 91, right hemisphere 27.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.2
Samples: 197

Max nTPM: 202.4
Min nTPM: 14.5
Std nTPM: 29.3
Median nTPM: 31.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 202.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 202.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 195.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 133.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 125.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 122.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 111.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 109.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 99.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 98.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.8
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 38.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.9
Sample A Female 13.4
Sample B Female 8.9
Sample C Male 11.5
Sample D Male 13.4
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.3
Sample A Female 16.9
Sample B Female 13.2
Sample C Male 15.4
Sample D Male 11.3
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.6
Sample A Female 16.2
Sample B Female 13.4
Sample C Male 13.2
Sample D Male 11.6
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 19.0
Min nTPM: 9.2
Sample A Female 12.8
Sample B Female 9.2
Sample C Male 19.0
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 15.7
Sample A Male 21.4
Sample B Male 24.8
Sample C Female 15.7
Sample D Female 18.7
Hippocampal formation
nTPM: 16.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.7
Sample A Male 15.7
Sample B Male 16.8
Sample C Female 16.2
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68321964 Antisense, RP_041207_01_B05, Mouse strain C57BL/6J (56 days, male) 1.7
73512494 Antisense, RP_051017_02_D05, Mouse strain C57BL/6J (56 days, male) 0.6

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