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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.8
nTPM
Monaco:
102.5
nTPM
Schmiedel:
26.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.8
HPA sample
nTPM
gdT-cell nTPM: 11.3
Samples: 6
Max nTPM: 14.4
Min nTPM: 6.9
P10809_1007
14.4
P10809_1022
12.3
P10809_1041
13.2
P10809_1060
6.9
P10809_1077
9.2
P10809_1098
11.5
MAIT T-cell nTPM: 40.9
Samples: 6
Max nTPM: 59.7
Min nTPM: 26.6
P10809_1006
59.7
P10809_1024
51.4
P10809_1043
42.5
P10809_1062
26.6
P10809_1083
34.7
P10809_1097
30.2
Memory CD4 T-cell nTPM: 4.8
Samples: 6
Max nTPM: 8.2
Min nTPM: 2.7
P10809_1014
3.9
P10809_1026
5.8
P10809_1045
4.7
P10809_1064
3.2
P10809_1086
8.2
P10809_1113
2.7
Memory CD8 T-cell nTPM: 16.4
Samples: 5
Max nTPM: 22.2
Min nTPM: 11.8
P10809_1012
20.8
P10809_1027
22.2
P10809_1046
14.7
P10809_1065
11.8
P10809_1111
12.6
Naive CD4 T-cell nTPM: 0.5
Samples: 6
Max nTPM: 2.6
Min nTPM: 0.0
P10809_1015
0.0
P10809_1030
0.0
P10809_1049
0.1
P10809_1068
0.0
P10809_1085
2.6
P10809_1112
0.0
Naive CD8 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 10.9
Min nTPM: 0.4
P10809_1016
1.7
P10809_1031
0.4
P10809_1050
3.8
P10809_1069
8.1
P10809_1087
10.9
P10809_1110
0.5
T-reg nTPM: 8.2
Samples: 6
Max nTPM: 16.3
Min nTPM: 4.2
P10809_1018
12.5
P10809_1037
4.9
P10809_1056
4.2
P10809_1075
6.4
P10809_1094
16.3
P10809_1106
5.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 16.9
Min nTPM: 5.9
RHH5202_R3573
16.5
RHH5230_R3602
10.1
RHH5259_R3631
16.9
RHH5288_R3660
5.9
Effector memory CD8 T-cell nTPM: 89.3
Samples: 4
Max nTPM: 127.6
Min nTPM: 57.2
RHH5203_R3574
127.6
RHH5231_R3603
57.2
RHH5260_R3632
98.7
RHH5289_R3661
73.6
MAIT T-cell nTPM: 102.5
Samples: 4
Max nTPM: 114.7
Min nTPM: 93.5
RHH5233_R3605
93.5
RHH5205_R3576
104.2
RHH5262_R3634
114.7
RHH5297_R3663
97.6
Memory CD4 T-cell TFH nTPM: 3.4
Samples: 4
Max nTPM: 4.8
Min nTPM: 1.8
RHH5300_R3666
4.8
RHH5236_R3608
3.7
RHH5265_R3637
3.3
RHH5208_R3579
1.8
Memory CD4 T-cell Th1 nTPM: 18.4
Samples: 4
Max nTPM: 27.3
Min nTPM: 12.4
RHH5210_R3581
12.4
RHH5302_R3668
16.1
RHH5238_R3610
27.3
RHH5267_R3639
17.8
Memory CD4 T-cell Th1/Th17 nTPM: 22.7
Samples: 4
Max nTPM: 39.1
Min nTPM: 7.0
RHH5303_R3669
24.4
RHH5211_R3582
39.1
RHH5239_R3611
7.0
RHH5268_R3640
20.1
Memory CD4 T-cell Th17 nTPM: 17.1
Samples: 4
Max nTPM: 28.1
Min nTPM: 9.0
RHH5304_R3670
28.1
RHH5212_R3583
9.0
RHH5240_R3612
11.3
RHH5269_R3641
19.9
Memory CD4 T-cell Th2 nTPM: 4.1
Samples: 4
Max nTPM: 5.2
Min nTPM: 3.4
RHH5305_R3671
3.8
RHH5213_R3584
4.1
RHH5241_R3613
3.4
RHH5270_R3642
5.2
Naive CD4 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 4.1
Min nTPM: 0.0
RHH5306_R3672
4.1
RHH5214_R3585
2.1
RHH5242_R3614
0.0
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 19.3
Samples: 4
Max nTPM: 28.9
Min nTPM: 12.4
RHH5235_R3607
28.9
RHH5264_R3636
14.1
RHH5207_R3578
21.9
RHH5299_R3665
12.4
T-reg nTPM: 10.7
Samples: 4
Max nTPM: 15.5
Min nTPM: 7.5
RHH5301_R3667
7.5
RHH5237_R3609
9.3
RHH5266_R3638
10.6
RHH5209_R3580
15.5
Terminal effector memory CD4 T-cell nTPM: 28.8
Samples: 2
Max nTPM: 36.1
Min nTPM: 21.5
RHH5243_R3615
36.1
RHH5272_R3644
21.5
Terminal effector memory CD8 T-cell nTPM: 25.9
Samples: 4
Max nTPM: 34.7
Min nTPM: 14.4
RHH5232_R3604
30.0
RHH5204_R3575
14.4
RHH5261_R3633
24.4
RHH5296_R3662
34.7
Vd2 gdTCR nTPM: 57.1
Samples: 4
Max nTPM: 82.8
Min nTPM: 38.8
RHH5234_R3606
45.9
RHH5206_R3577
38.8
RHH5263_R3635
82.8
RHH5298_R3664
61.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
