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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
195.9
nTPM
Monaco:
108.3
nTPM
Schmiedel:
28.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
195.9
HPA sample
nTPM
gdT-cell nTPM: 188.8
Samples: 6
Max nTPM: 254.7
Min nTPM: 131.4
P10809_1007
131.4
P10809_1022
203.9
P10809_1041
254.7
P10809_1060
188.9
P10809_1077
162.3
P10809_1098
191.7
MAIT T-cell nTPM: 147.7
Samples: 6
Max nTPM: 195.5
Min nTPM: 93.6
P10809_1006
93.6
P10809_1024
125.4
P10809_1043
195.5
P10809_1062
144.5
P10809_1083
146.9
P10809_1097
180.2
Memory CD4 T-cell nTPM: 143.5
Samples: 6
Max nTPM: 177.0
Min nTPM: 94.7
P10809_1014
94.7
P10809_1026
177.0
P10809_1045
165.5
P10809_1064
142.1
P10809_1086
138.0
P10809_1113
143.7
Memory CD8 T-cell nTPM: 166.8
Samples: 5
Max nTPM: 195.1
Min nTPM: 113.4
P10809_1012
113.4
P10809_1027
191.7
P10809_1046
195.1
P10809_1065
165.9
P10809_1111
167.7
Naive CD4 T-cell nTPM: 122.7
Samples: 6
Max nTPM: 171.6
Min nTPM: 74.6
P10809_1015
74.6
P10809_1030
153.4
P10809_1049
171.6
P10809_1068
105.0
P10809_1085
116.1
P10809_1112
115.5
Naive CD8 T-cell nTPM: 143.6
Samples: 6
Max nTPM: 189.0
Min nTPM: 76.9
P10809_1016
76.9
P10809_1031
189.0
P10809_1050
129.9
P10809_1069
184.8
P10809_1087
155.6
P10809_1110
125.2
T-reg nTPM: 195.9
Samples: 6
Max nTPM: 382.3
Min nTPM: 107.5
P10809_1018
107.5
P10809_1037
174.1
P10809_1056
382.3
P10809_1075
177.8
P10809_1094
161.5
P10809_1106
172.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.5
Samples: 4
Max nTPM: 89.7
Min nTPM: 32.5
RHH5202_R3573
58.7
RHH5230_R3602
32.5
RHH5259_R3631
49.1
RHH5288_R3660
89.7
Effector memory CD8 T-cell nTPM: 56.7
Samples: 4
Max nTPM: 65.5
Min nTPM: 47.8
RHH5203_R3574
65.5
RHH5231_R3603
58.9
RHH5260_R3632
47.8
RHH5289_R3661
54.7
MAIT T-cell nTPM: 61.8
Samples: 4
Max nTPM: 91.8
Min nTPM: 48.4
RHH5233_R3605
58.1
RHH5205_R3576
49.0
RHH5262_R3634
48.4
RHH5297_R3663
91.8
Memory CD4 T-cell TFH nTPM: 68.7
Samples: 4
Max nTPM: 87.8
Min nTPM: 42.2
RHH5300_R3666
84.4
RHH5236_R3608
87.8
RHH5265_R3637
60.4
RHH5208_R3579
42.2
Memory CD4 T-cell Th1 nTPM: 70.1
Samples: 4
Max nTPM: 102.8
Min nTPM: 42.1
RHH5210_R3581
74.0
RHH5302_R3668
102.8
RHH5238_R3610
61.6
RHH5267_R3639
42.1
Memory CD4 T-cell Th1/Th17 nTPM: 61.8
Samples: 4
Max nTPM: 97.4
Min nTPM: 37.4
RHH5303_R3669
97.4
RHH5211_R3582
65.7
RHH5239_R3611
37.4
RHH5268_R3640
46.7
Memory CD4 T-cell Th17 nTPM: 54.0
Samples: 4
Max nTPM: 77.8
Min nTPM: 36.2
RHH5304_R3670
53.4
RHH5212_R3583
77.8
RHH5240_R3612
48.5
RHH5269_R3641
36.2
Memory CD4 T-cell Th2 nTPM: 51.9
Samples: 4
Max nTPM: 57.7
Min nTPM: 48.1
RHH5305_R3671
57.7
RHH5213_R3584
53.7
RHH5241_R3613
48.2
RHH5270_R3642
48.1
Naive CD4 T-cell nTPM: 56.0
Samples: 4
Max nTPM: 85.6
Min nTPM: 34.7
RHH5306_R3672
60.1
RHH5214_R3585
85.6
RHH5242_R3614
43.7
RHH5271_R3643
34.7
Naive CD8 T-cell nTPM: 47.5
Samples: 4
Max nTPM: 65.0
Min nTPM: 19.2
RHH5201_R3572
51.5
RHH5229_R3601
19.2
RHH5258_R3630
65.0
RHH5287_R3659
54.1
Non-Vd2 gdTCR nTPM: 83.5
Samples: 4
Max nTPM: 119.2
Min nTPM: 53.1
RHH5235_R3607
53.1
RHH5264_R3636
87.0
RHH5207_R3578
74.7
RHH5299_R3665
119.2
T-reg nTPM: 68.9
Samples: 4
Max nTPM: 96.5
Min nTPM: 50.6
RHH5301_R3667
96.5
RHH5237_R3609
55.4
RHH5266_R3638
50.6
RHH5209_R3580
73.2
Terminal effector memory CD4 T-cell nTPM: 76.0
Samples: 2
Max nTPM: 82.5
Min nTPM: 69.4
RHH5243_R3615
82.5
RHH5272_R3644
69.4
Terminal effector memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 177.3
Min nTPM: 53.5
RHH5232_R3604
53.5
RHH5204_R3575
177.3
RHH5261_R3633
61.0
RHH5296_R3662
90.9
Vd2 gdTCR nTPM: 108.3
Samples: 4
Max nTPM: 193.8
Min nTPM: 57.6
RHH5234_R3606
61.8
RHH5206_R3577
193.8
RHH5263_R3635
57.6
RHH5298_R3664
120.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
