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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
250.2
nTPM
Monaco:
478.7
nTPM
Schmiedel:
266.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
250.2
HPA sample
nTPM
gdT-cell nTPM: 250.2
Samples: 6
Max nTPM: 284.5
Min nTPM: 211.6
P10809_1007
260.0
P10809_1022
243.4
P10809_1041
262.3
P10809_1060
239.5
P10809_1077
211.6
P10809_1098
284.5
MAIT T-cell nTPM: 214.9
Samples: 6
Max nTPM: 271.7
Min nTPM: 183.7
P10809_1006
234.4
P10809_1024
183.7
P10809_1043
191.4
P10809_1062
271.7
P10809_1083
224.3
P10809_1097
184.1
Memory CD4 T-cell nTPM: 175.7
Samples: 6
Max nTPM: 195.6
Min nTPM: 142.2
P10809_1014
191.1
P10809_1026
195.6
P10809_1045
142.2
P10809_1064
186.0
P10809_1086
183.7
P10809_1113
155.4
Memory CD8 T-cell nTPM: 202.4
Samples: 5
Max nTPM: 241.9
Min nTPM: 180.5
P10809_1012
241.9
P10809_1027
181.9
P10809_1046
204.6
P10809_1065
203.1
P10809_1111
180.5
Naive CD4 T-cell nTPM: 115.0
Samples: 6
Max nTPM: 131.2
Min nTPM: 98.8
P10809_1015
131.2
P10809_1030
100.9
P10809_1049
98.8
P10809_1068
121.3
P10809_1085
116.5
P10809_1112
121.2
Naive CD8 T-cell nTPM: 147.2
Samples: 6
Max nTPM: 176.1
Min nTPM: 119.5
P10809_1016
135.1
P10809_1031
138.2
P10809_1050
142.0
P10809_1069
176.1
P10809_1087
172.2
P10809_1110
119.5
T-reg nTPM: 178.6
Samples: 6
Max nTPM: 262.9
Min nTPM: 113.7
P10809_1018
262.9
P10809_1037
134.1
P10809_1056
113.7
P10809_1075
170.2
P10809_1094
212.5
P10809_1106
178.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
478.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 179.2
Samples: 4
Max nTPM: 212.6
Min nTPM: 122.0
RHH5202_R3573
122.0
RHH5230_R3602
174.1
RHH5259_R3631
212.6
RHH5288_R3660
208.1
Effector memory CD8 T-cell nTPM: 363.1
Samples: 4
Max nTPM: 530.7
Min nTPM: 185.6
RHH5203_R3574
530.7
RHH5231_R3603
365.4
RHH5260_R3632
370.5
RHH5289_R3661
185.6
MAIT T-cell nTPM: 371.3
Samples: 4
Max nTPM: 549.5
Min nTPM: 292.4
RHH5233_R3605
292.4
RHH5205_R3576
549.5
RHH5262_R3634
344.5
RHH5297_R3663
298.7
Memory CD4 T-cell TFH nTPM: 164.3
Samples: 4
Max nTPM: 232.4
Min nTPM: 76.9
RHH5300_R3666
174.0
RHH5236_R3608
173.7
RHH5265_R3637
232.4
RHH5208_R3579
76.9
Memory CD4 T-cell Th1 nTPM: 209.1
Samples: 4
Max nTPM: 289.7
Min nTPM: 116.9
RHH5210_R3581
289.7
RHH5302_R3668
177.2
RHH5238_R3610
116.9
RHH5267_R3639
252.7
Memory CD4 T-cell Th1/Th17 nTPM: 209.5
Samples: 4
Max nTPM: 384.1
Min nTPM: 89.8
RHH5303_R3669
89.8
RHH5211_R3582
384.1
RHH5239_R3611
105.9
RHH5268_R3640
258.1
Memory CD4 T-cell Th17 nTPM: 252.8
Samples: 4
Max nTPM: 337.6
Min nTPM: 178.3
RHH5304_R3670
257.9
RHH5212_R3583
337.6
RHH5240_R3612
178.3
RHH5269_R3641
237.4
Memory CD4 T-cell Th2 nTPM: 246.9
Samples: 4
Max nTPM: 398.2
Min nTPM: 107.5
RHH5305_R3671
214.1
RHH5213_R3584
398.2
RHH5241_R3613
107.5
RHH5270_R3642
267.7
Naive CD4 T-cell nTPM: 206.9
Samples: 4
Max nTPM: 339.1
Min nTPM: 92.6
RHH5306_R3672
161.4
RHH5214_R3585
339.1
RHH5242_R3614
92.6
RHH5271_R3643
234.3
Naive CD8 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 108.0
Min nTPM: 14.2
RHH5201_R3572
14.2
RHH5229_R3601
59.4
RHH5258_R3630
107.6
RHH5287_R3659
108.0
Non-Vd2 gdTCR nTPM: 449.3
Samples: 4
Max nTPM: 483.5
Min nTPM: 410.7
RHH5235_R3607
450.5
RHH5264_R3636
452.3
RHH5207_R3578
483.5
RHH5299_R3665
410.7
T-reg nTPM: 288.8
Samples: 4
Max nTPM: 420.1
Min nTPM: 205.8
RHH5301_R3667
214.6
RHH5237_R3609
205.8
RHH5266_R3638
314.7
RHH5209_R3580
420.1
Terminal effector memory CD4 T-cell nTPM: 293.2
Samples: 2
Max nTPM: 358.0
Min nTPM: 228.3
RHH5243_R3615
228.3
RHH5272_R3644
358.0
Terminal effector memory CD8 T-cell nTPM: 478.7
Samples: 4
Max nTPM: 832.2
Min nTPM: 233.8
RHH5232_R3604
463.8
RHH5204_R3575
832.2
RHH5261_R3633
384.9
RHH5296_R3662
233.8
Vd2 gdTCR nTPM: 447.9
Samples: 4
Max nTPM: 613.7
Min nTPM: 308.8
RHH5234_R3606
386.8
RHH5206_R3577
613.7
RHH5263_R3635
482.2
RHH5298_R3664
308.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
