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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.8
nTPM
Monaco:
23.9
nTPM
Schmiedel:
12.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.8
HPA sample
nTPM
gdT-cell nTPM: 45.1
Samples: 6
Max nTPM: 50.4
Min nTPM: 31.9
P10809_1007
31.9
P10809_1022
50.4
P10809_1041
45.0
P10809_1060
44.3
P10809_1077
49.9
P10809_1098
49.1
MAIT T-cell nTPM: 38.7
Samples: 6
Max nTPM: 53.1
Min nTPM: 23.6
P10809_1006
23.6
P10809_1024
29.5
P10809_1043
42.6
P10809_1062
53.1
P10809_1083
38.9
P10809_1097
44.5
Memory CD4 T-cell nTPM: 42.0
Samples: 6
Max nTPM: 55.2
Min nTPM: 30.0
P10809_1014
30.0
P10809_1026
48.7
P10809_1045
37.1
P10809_1064
55.2
P10809_1086
37.2
P10809_1113
43.9
Memory CD8 T-cell nTPM: 46.1
Samples: 5
Max nTPM: 57.9
Min nTPM: 25.3
P10809_1012
25.3
P10809_1027
46.8
P10809_1046
57.9
P10809_1065
54.8
P10809_1111
45.7
Naive CD4 T-cell nTPM: 30.0
Samples: 6
Max nTPM: 38.0
Min nTPM: 16.3
P10809_1015
16.3
P10809_1030
23.2
P10809_1049
33.2
P10809_1068
37.3
P10809_1085
32.0
P10809_1112
38.0
Naive CD8 T-cell nTPM: 33.4
Samples: 6
Max nTPM: 48.4
Min nTPM: 19.7
P10809_1016
19.7
P10809_1031
25.2
P10809_1050
36.3
P10809_1069
48.4
P10809_1087
40.7
P10809_1110
29.9
T-reg nTPM: 51.8
Samples: 6
Max nTPM: 68.2
Min nTPM: 38.7
P10809_1018
38.7
P10809_1037
52.5
P10809_1056
51.9
P10809_1075
51.3
P10809_1094
68.2
P10809_1106
47.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.2
Samples: 4
Max nTPM: 24.0
Min nTPM: 4.9
RHH5202_R3573
4.9
RHH5230_R3602
13.0
RHH5259_R3631
10.7
RHH5288_R3660
24.0
Effector memory CD8 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 14.1
Min nTPM: 8.1
RHH5203_R3574
8.1
RHH5231_R3603
10.4
RHH5260_R3632
14.1
RHH5289_R3661
9.9
MAIT T-cell nTPM: 16.9
Samples: 4
Max nTPM: 24.0
Min nTPM: 11.6
RHH5233_R3605
11.6
RHH5205_R3576
12.1
RHH5262_R3634
19.8
RHH5297_R3663
24.0
Memory CD4 T-cell TFH nTPM: 17.6
Samples: 4
Max nTPM: 24.1
Min nTPM: 10.6
RHH5300_R3666
19.4
RHH5236_R3608
24.1
RHH5265_R3637
10.6
RHH5208_R3579
16.1
Memory CD4 T-cell Th1 nTPM: 15.2
Samples: 4
Max nTPM: 16.6
Min nTPM: 13.5
RHH5210_R3581
13.5
RHH5302_R3668
16.6
RHH5238_R3610
15.7
RHH5267_R3639
15.1
Memory CD4 T-cell Th1/Th17 nTPM: 15.8
Samples: 4
Max nTPM: 24.9
Min nTPM: 6.0
RHH5303_R3669
24.9
RHH5211_R3582
19.8
RHH5239_R3611
6.0
RHH5268_R3640
12.5
Memory CD4 T-cell Th17 nTPM: 15.2
Samples: 4
Max nTPM: 21.7
Min nTPM: 9.0
RHH5304_R3670
14.2
RHH5212_R3583
21.7
RHH5240_R3612
16.0
RHH5269_R3641
9.0
Memory CD4 T-cell Th2 nTPM: 15.8
Samples: 4
Max nTPM: 17.4
Min nTPM: 14.9
RHH5305_R3671
17.4
RHH5213_R3584
15.9
RHH5241_R3613
15.0
RHH5270_R3642
14.9
Naive CD4 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 23.0
Min nTPM: 5.4
RHH5306_R3672
13.9
RHH5214_R3585
23.0
RHH5242_R3614
6.8
RHH5271_R3643
5.4
Naive CD8 T-cell nTPM: 7.1
Samples: 4
Max nTPM: 9.0
Min nTPM: 3.0
RHH5201_R3572
7.9
RHH5229_R3601
3.0
RHH5258_R3630
8.3
RHH5287_R3659
9.0
Non-Vd2 gdTCR nTPM: 16.6
Samples: 4
Max nTPM: 23.5
Min nTPM: 9.7
RHH5235_R3607
11.1
RHH5264_R3636
23.5
RHH5207_R3578
9.7
RHH5299_R3665
22.2
T-reg nTPM: 15.5
Samples: 4
Max nTPM: 18.9
Min nTPM: 11.3
RHH5301_R3667
18.1
RHH5237_R3609
18.9
RHH5266_R3638
11.3
RHH5209_R3580
13.5
Terminal effector memory CD4 T-cell nTPM: 11.7
Samples: 2
Max nTPM: 12.8
Min nTPM: 10.6
RHH5243_R3615
10.6
RHH5272_R3644
12.8
Terminal effector memory CD8 T-cell nTPM: 21.9
Samples: 4
Max nTPM: 34.0
Min nTPM: 14.5
RHH5232_R3604
14.5
RHH5204_R3575
34.0
RHH5261_R3633
20.2
RHH5296_R3662
18.8
Vd2 gdTCR nTPM: 23.9
Samples: 4
Max nTPM: 37.6
Min nTPM: 7.3
RHH5234_R3606
7.3
RHH5206_R3577
34.3
RHH5263_R3635
16.4
RHH5298_R3664
37.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
