HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.1 nTPM
HPA Brain:18.7 nTPM
GTEx:15.1 nTPM
FANTOM5:1.0 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:5.8 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023631Antibody HPA023635
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
2621 Female, age 67, right hemisphere 21.1
2529 Female, age 94, left hemisphere 16.7
2148 Female, age 91, left hemisphere 15.4
1911 Female, age 85, right hemisphere 15.1
1898 Male, age 80, left hemisphere 14.4
1855 Male, age 76, left hemisphere 11.4
Dentate gyrus
nTPM: 15.4
2531 Female, age 67, both hemispheres 21.3
2530 Female, age 94, left hemisphere 15.4
1927 Female, age 91, both hemispheres 15.1
2010 Male, age 76, both hemispheres 15.0
2246 Female, age 85, both hemispheres 13.5
2528 Male, age 74, both hemispheres 12.4
Entorhinal gyrus
nTPM: 15.6
2686 Male, age 75, right hemisphere 18.3
1787 Male, age 76, left hemisphere 16.7
2613 Female, age 94, left hemisphere 16.6
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 14.4
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 19.8
1873 Female, age 85, both hemispheres 15.1
2045 Male, age 76, both hemispheres 13.7
2527 Male, age 74, both hemispheres 13.7
2082 Female, age 91, right hemisphere 12.0
Hippocampus, CA2
nTPM: 13.7
2437 Female, age 94, left hemisphere 17.2
1892 Male, age 76, both hemispheres 17.0
1940 Female, age 85, left hemisphere 13.4
1963 Male, age 80, left hemisphere 13.4
2113 Female, age 91, right hemisphere 11.6
2249 Male, age 74, both hemispheres 9.6
Hippocampus, CA3
nTPM: 18.7
2620 Female, age 94, left hemisphere 32.3
2861 Female, age 67, both hemispheres 22.0
2137 Male, age 80, left hemisphere 16.7
1867 Male, age 76, both hemispheres 15.4
1891 Female, age 85, both hemispheres 13.0
2436 Male, age 74, both hemispheres 12.8
Parahippocampal cortex
nTPM: 14.6
2622 Female, age 67, right hemisphere 19.9
2245 Female, age 91, both hemispheres 16.1
2532 Female, age 72, left hemisphere 15.1
2693 Female, age 94, both hemispheres 15.0
1850 Male, age 80, both hemispheres 14.9
2692 Male, age 74, both hemispheres 14.4
1990 Female, age 91, right hemisphere 12.8
2250 Female, age 67, right hemisphere 12.8
2018 Male, age 76, both hemispheres 12.7
1933 Female, age 85, both hemispheres 12.4
Perirhinal gyrus
nTPM: 15.3
1794 Male, age 80, right hemisphere 16.5
1847 Female, age 91, left hemisphere 15.7
1841 Female, age 85, right hemisphere 15.2
2521 Female, age 94, right hemisphere 14.4
2848 Male, age 76, right hemisphere 14.4
Subiculum
nTPM: 16.2
2438 Female, age 94, left hemisphere 23.2
2042 Male, age 76, both hemispheres 18.1
1901 Male, age 80, both hemispheres 15.5
2619 Male, age 74, both hemispheres 13.9
2729 Female, age 91, right hemisphere 13.9
1977 Female, age 85, both hemispheres 12.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.1
Samples: 197

Max nTPM: 40.9
Min nTPM: 4.9
Std nTPM: 6.0
Median nTPM: 14.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 40.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 30.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 27.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 27.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 26.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.0
FF:10169-103B7 60 years, female 1.0
FF:10153-102I9 76 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.0
Sample A Female 11.4
Sample B Female 8.7
Sample C Male 9.8
Sample D Male 8.0
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Female 12.5
Sample B Female 11.8
Sample C Male 10.6
Sample D Male 11.0
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.2
Sample C Male 9.7
Sample D Male 9.7
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.3
Sample A Female 8.7
Sample B Female 8.3
Sample C Male 12.4
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.8
Sample A Male 6.0
Sample B Male 6.3
Sample C Female 4.8
Sample D Female 5.3
Hippocampal formation
nTPM: 5.8
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.9
Sample A Male 5.6
Sample B Male 6.8
Sample C Female 4.9
Sample D Female 5.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68191246 Antisense, RP_041123_02_B10, Mouse strain C57BL/6J (56 days, male) 1.2

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