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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
538.2
nTPM
FANTOM5:
107.7
Scaled Tags Per Million
Pig:
343.9
nTPM
Allen mouse:
8.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
538.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 510.9
2188
Female, age 91, both hemispheres
609.7
2090
Male, age 80, both hemispheres
539.6
2301
Female, age 85, both hemispheres
504.9
1984
Male, age 76, both hemispheres
389.5
Dorsal cochlear nucleus nTPM: 471.3
2187
Female, age 91, both hemispheres
550.5
2802
Male, age 74, right hemisphere
532.1
2370
Male, age 61, both hemispheres
483.9
2378
Male, age 80, both hemispheres
452.5
2058
Male, age 76, both hemispheres
337.6
Dorsal tegmental nucleus nTPM: 471.9
2358
Male, age 61, both hemispheres
505.3
2083
Male, age 80, both hemispheres
504.7
2326
Male, age 74, both hemispheres
499.6
1936
Male, age 76, left hemisphere
378.0
Dorsolateral tegmental area nTPM: 491.5
2337
Male, age 61, both hemispheres
579.3
2654
Male, age 80, both hemispheres
575.8
2751
Female, age 85, both hemispheres
489.4
2360
Male, age 74, both hemispheres
431.0
2141
Male, age 76, both hemispheres
382.0
Kolliker-Fuse nucleus nTPM: 503.5
2793
Female, age 91, left hemisphere
596.3
2315
Male, age 76, right hemisphere
468.7
2163
Male, age 80, both hemispheres
445.3
Lateral lemniscal nuclei nTPM: 376.9
2169
Male, age 76, both hemispheres
432.0
2320
Female, age 91, left hemisphere
415.7
2746
Female, age 85, left hemisphere
414.9
2453
Male, age 74, right hemisphere
351.2
2036
Male, age 80, both hemispheres
270.6
Lateral parabrachial nucleus nTPM: 493.1
2792
Male, age 76, both hemispheres
624.0
2013
Male, age 80, both hemispheres
530.9
2139
Female, age 85, right hemisphere
453.9
2790
Male, age 61, both hemispheres
363.5
Lateral vestibular nucleus nTPM: 437.6
2311
Male, age 80, both hemispheres
519.8
2184
Male, age 76, both hemispheres
355.5
Locus coeruleus nTPM: 384.5
2720
Male, age 74, both hemispheres
541.0
2162
Male, age 80, both hemispheres
401.3
2123
Female, age 91, both hemispheres
387.3
2788
Male, age 74, unknown
373.3
2014
Male, age 55, unknown
343.2
2317
Female, age 72, unknown
335.6
1980
Male, age 76, both hemispheres
309.7
Medial parabrachial nucleus nTPM: 469.8
2170
Female, age 91, both hemispheres
613.4
2854
Male, age 80, both hemispheres
573.8
2463
Female, age 85, right hemisphere
419.6
2786
Male, age 76, both hemispheres
398.1
2156
Male, age 61, both hemispheres
344.1
Medial periolivary nuclei nTPM: 426.7
2458
Female, age 91, both hemispheres
486.4
2063
Male, age 76, both hemispheres
447.6
2081
Male, age 80, both hemispheres
446.3
2791
Male, age 74, right hemisphere
407.4
2171
Female, age 85, both hemispheres
345.9
Motor facial nucleus nTPM: 415.8
2697
Female, age 85, both hemispheres
506.9
2795
Female, age 91, both hemispheres
454.1
2365
Male, age 74, right hemisphere
413.0
2126
Male, age 61, both hemispheres
410.2
2062
Male, age 76, both hemispheres
391.8
2327
Male, age 80, both hemispheres
318.8
Motor trigeminal nucleus nTPM: 422.6
2321
Female, age 91, both hemispheres
486.7
2335
Male, age 61, both hemispheres
435.9
2309
Male, age 76, both hemispheres
423.3
2560
Male, age 74, both hemispheres
419.5
2079
Male, age 80, both hemispheres
347.8
Nuclei of the trapezoid body nTPM: 390.9
1983
Male, age 76, both hemispheres
476.1
2166
Male, age 80, both hemispheres
409.9
2159
Male, age 61, both hemispheres
395.3
2368
Female, age 91, both hemispheres
384.5
2735
Female, age 85, both hemispheres
288.9
Nucleus raphe magnus nTPM: 376.3
2459
Female, age 91, both hemispheres
419.4
2455
Male, age 74, both hemispheres
384.5
2328
Male, age 80, both hemispheres
383.7
2051
Male, age 76, both hemispheres
373.7
2160
Male, age 61, both hemispheres
357.1
2172
Female, age 85, both hemispheres
339.6
Paramedian reticular nucleus nTPM: 439.9
2052
Male, age 76, both hemispheres
473.4
2313
Male, age 61, both hemispheres
438.6
2057
Male, age 80, both hemispheres
429.7
2050
Female, age 85, both hemispheres
418.0
Pedunculopontine tegmental nucleus nTPM: 467.3
2338
Male, age 61, both hemispheres
568.3
2334
Male, age 80, both hemispheres
489.3
1921
Female, age 85, both hemispheres
344.3
Pontine nuclei nTPM: 438.3
2319
Female, age 91, both hemispheres
558.3
1968
Male, age 76, left hemisphere
464.1
2454
Male, age 74, left hemisphere
456.7
1863
Male, age 55, unknown
437.5
2115
Male, age 80, left hemisphere
422.9
2787
Female, age 85, both hemispheres
420.7
2109
Female, age 72, unknown
398.2
2727
Male, age 61, right hemisphere
347.8
Pontine raphe nucleus nTPM: 397.4
2853
Male, age 76, midline
399.4
2122
Female, age 85, midline
395.4
Posteroventral cochlear nucleus nTPM: 538.2
2341
Male, age 80, both hemispheres
708.2
2135
Female, age 91, both hemispheres
635.7
2371
Male, age 61, both hemispheres
518.1
2070
Male, age 76, both hemispheres
419.7
2752
Female, age 85, both hemispheres
409.4
Principal sensory trigeminal nucleus nTPM: 379.5
2367
Female, age 91, left hemisphere
450.3
2324
Male, age 76, both hemispheres
379.7
2158
Male, age 61, both hemispheres
376.1
2008
Male, age 80, left hemisphere
312.0
Reticular pontine nucleus, caudal nTPM: 435.7
2457
Female, age 91, both hemispheres
504.2
2092
Male, age 76, both hemispheres
478.1
2559
Male, age 74, both hemispheres
467.1
2332
Male, age 80, right hemisphere
293.4
Reticular pontine nucleus, oral nTPM: 472.6
2366
Female, age 91, both hemispheres
557.1
2361
Male, age 74, both hemispheres
477.5
1939
Male, age 80, both hemispheres
475.4
2167
Male, age 76, both hemispheres
464.5
2012
Female, age 85, both hemispheres
388.4
Reticulotegmental nucleus nTPM: 418.4
2452
Male, age 74, both hemispheres
478.5
2322
Female, age 91, both hemispheres
461.4
2325
Male, age 76, both hemispheres
369.0
2333
Male, age 80, both hemispheres
364.8
Spinal trigeminal nucleus, oral nTPM: 394.6
2164
Male, age 80, both hemispheres
427.5
1978
Male, age 76, both hemispheres
385.8
2737
Female, age 85, both hemispheres
370.6
Subcoeruleus area nTPM: 442.9
2451
Male, age 74, both hemispheres
513.2
2369
Female, age 85, left hemisphere
502.2
1958
Male, age 80, both hemispheres
421.3
2323
Female, age 91, left hemisphere
396.8
2089
Male, age 76, left hemisphere
381.1
Superior olive nTPM: 422.6
2020
Male, age 76, both hemispheres
479.1
2561
Female, age 91, both hemispheres
461.2
2364
Male, age 74, right hemisphere
448.1
1875
Female, age 85, both hemispheres
370.0
2329
Male, age 80, right hemisphere
354.5
Ventral periolivary nuclei nTPM: 416.6
2023
Male, age 76, both hemispheres
456.6
2794
Female, age 91, left hemisphere
444.5
2165
Male, age 80, both hemispheres
407.4
2130
Female, age 85, both hemispheres
357.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 432.2
2840
Female, age 85, both hemispheres
507.3
2161
Male, age 80, both hemispheres
437.8
2359
Male, age 61, both hemispheres
433.3
2456
Female, age 91, both hemispheres
428.4
1959
Male, age 76, both hemispheres
418.8
2449
Male, age 74, both hemispheres
367.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
343.9
Pig sample
Sample description
nTPM
Pons nTPM: 344.0
Samples: 4
Max nTPM: 369.4
Min nTPM: 291.0
Sample A
Female
357.9
Sample B
Female
291.0
Sample C
Male
369.4
Sample D
Male
357.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
