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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
563.9
nTPM
Monaco:
193.3
nTPM
Schmiedel:
218.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
563.9
HPA sample
nTPM
gdT-cell nTPM: 274.5
Samples: 6
Max nTPM: 329.8
Min nTPM: 224.8
P10809_1007
224.8
P10809_1022
324.2
P10809_1041
329.8
P10809_1060
262.7
P10809_1077
237.3
P10809_1098
268.3
MAIT T-cell nTPM: 350.9
Samples: 6
Max nTPM: 434.9
Min nTPM: 246.4
P10809_1006
246.4
P10809_1024
355.7
P10809_1043
368.5
P10809_1062
434.9
P10809_1083
317.2
P10809_1097
382.7
Memory CD4 T-cell nTPM: 416.4
Samples: 6
Max nTPM: 511.7
Min nTPM: 298.7
P10809_1014
355.8
P10809_1026
511.7
P10809_1045
490.4
P10809_1064
394.7
P10809_1086
298.7
P10809_1113
447.2
Memory CD8 T-cell nTPM: 323.7
Samples: 5
Max nTPM: 361.5
Min nTPM: 298.1
P10809_1012
321.5
P10809_1027
306.8
P10809_1046
361.5
P10809_1065
298.1
P10809_1111
330.5
Naive CD4 T-cell nTPM: 496.2
Samples: 6
Max nTPM: 633.7
Min nTPM: 367.0
P10809_1015
367.0
P10809_1030
551.1
P10809_1049
633.7
P10809_1068
528.7
P10809_1085
386.9
P10809_1112
510.0
Naive CD8 T-cell nTPM: 366.9
Samples: 6
Max nTPM: 446.9
Min nTPM: 243.5
P10809_1016
375.5
P10809_1031
359.6
P10809_1050
372.3
P10809_1069
403.3
P10809_1087
243.5
P10809_1110
446.9
T-reg nTPM: 563.9
Samples: 6
Max nTPM: 824.1
Min nTPM: 398.6
P10809_1018
398.6
P10809_1037
497.6
P10809_1056
824.1
P10809_1075
459.7
P10809_1094
596.5
P10809_1106
606.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 189.2
Min nTPM: 90.5
RHH5202_R3573
101.6
RHH5230_R3602
116.7
RHH5259_R3631
90.5
RHH5288_R3660
189.2
Effector memory CD8 T-cell nTPM: 120.9
Samples: 4
Max nTPM: 146.9
Min nTPM: 92.9
RHH5203_R3574
135.8
RHH5231_R3603
146.9
RHH5260_R3632
92.9
RHH5289_R3661
107.9
MAIT T-cell nTPM: 121.6
Samples: 4
Max nTPM: 193.7
Min nTPM: 53.2
RHH5233_R3605
125.0
RHH5205_R3576
53.2
RHH5262_R3634
114.5
RHH5297_R3663
193.7
Memory CD4 T-cell TFH nTPM: 193.3
Samples: 4
Max nTPM: 246.5
Min nTPM: 169.1
RHH5300_R3666
183.4
RHH5236_R3608
246.5
RHH5265_R3637
174.3
RHH5208_R3579
169.1
Memory CD4 T-cell Th1 nTPM: 176.4
Samples: 4
Max nTPM: 273.8
Min nTPM: 107.3
RHH5210_R3581
193.5
RHH5302_R3668
273.8
RHH5238_R3610
131.0
RHH5267_R3639
107.3
Memory CD4 T-cell Th1/Th17 nTPM: 162.2
Samples: 4
Max nTPM: 252.2
Min nTPM: 73.2
RHH5303_R3669
252.2
RHH5211_R3582
229.9
RHH5239_R3611
73.2
RHH5268_R3640
93.3
Memory CD4 T-cell Th17 nTPM: 138.9
Samples: 4
Max nTPM: 224.4
Min nTPM: 92.4
RHH5304_R3670
140.4
RHH5212_R3583
224.4
RHH5240_R3612
98.4
RHH5269_R3641
92.4
Memory CD4 T-cell Th2 nTPM: 167.3
Samples: 4
Max nTPM: 241.1
Min nTPM: 125.0
RHH5305_R3671
164.7
RHH5213_R3584
138.4
RHH5241_R3613
241.1
RHH5270_R3642
125.0
Naive CD4 T-cell nTPM: 182.4
Samples: 4
Max nTPM: 222.6
Min nTPM: 89.9
RHH5306_R3672
207.1
RHH5214_R3585
222.6
RHH5242_R3614
209.9
RHH5271_R3643
89.9
Naive CD8 T-cell nTPM: 157.7
Samples: 4
Max nTPM: 222.1
Min nTPM: 101.3
RHH5201_R3572
144.2
RHH5229_R3601
101.3
RHH5258_R3630
222.1
RHH5287_R3659
163.0
Non-Vd2 gdTCR nTPM: 123.5
Samples: 4
Max nTPM: 168.5
Min nTPM: 63.7
RHH5235_R3607
63.7
RHH5264_R3636
168.5
RHH5207_R3578
100.4
RHH5299_R3665
161.5
T-reg nTPM: 178.3
Samples: 4
Max nTPM: 247.1
Min nTPM: 99.4
RHH5301_R3667
247.1
RHH5237_R3609
225.0
RHH5266_R3638
99.4
RHH5209_R3580
141.6
Terminal effector memory CD4 T-cell nTPM: 116.9
Samples: 2
Max nTPM: 170.7
Min nTPM: 63.1
RHH5243_R3615
63.1
RHH5272_R3644
170.7
Terminal effector memory CD8 T-cell nTPM: 128.3
Samples: 4
Max nTPM: 167.9
Min nTPM: 60.8
RHH5232_R3604
124.9
RHH5204_R3575
167.9
RHH5261_R3633
60.8
RHH5296_R3662
159.5
Vd2 gdTCR nTPM: 141.8
Samples: 4
Max nTPM: 187.9
Min nTPM: 91.3
RHH5234_R3606
115.7
RHH5206_R3577
187.9
RHH5263_R3635
91.3
RHH5298_R3664
172.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.