HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.2 nTPM
HPA Brain:18.9 nTPM
GTEx:42.2 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:41.2 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043835
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
2529 Female, age 94, left hemisphere 19.3
1898 Male, age 80, left hemisphere 18.4
2148 Female, age 91, left hemisphere 14.9
1855 Male, age 76, left hemisphere 14.3
1911 Female, age 85, right hemisphere 14.3
2621 Female, age 67, right hemisphere 11.3
Dentate gyrus
nTPM: 15.8
2531 Female, age 67, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.8
2010 Male, age 76, both hemispheres 16.7
1927 Female, age 91, both hemispheres 15.9
2530 Female, age 94, left hemisphere 14.8
2246 Female, age 85, both hemispheres 13.8
Entorhinal gyrus
nTPM: 12.8
1787 Male, age 76, left hemisphere 15.3
2764 Male, age 80, right hemisphere 15.1
1938 Female, age 85, left hemisphere 13.0
2117 Female, age 91, right hemisphere 12.7
2686 Male, age 75, right hemisphere 11.8
2613 Female, age 94, left hemisphere 8.9
Hippocampus, CA1
nTPM: 15.6
1873 Female, age 85, both hemispheres 17.5
2527 Male, age 74, both hemispheres 17.1
2749 Male, age 80, left hemisphere 15.5
2045 Male, age 76, both hemispheres 14.4
2082 Female, age 91, right hemisphere 13.7
Hippocampus, CA2
nTPM: 14.4
2249 Male, age 74, both hemispheres 17.0
1892 Male, age 76, both hemispheres 16.5
1963 Male, age 80, left hemisphere 14.6
2113 Female, age 91, right hemisphere 13.7
2437 Female, age 94, left hemisphere 13.0
1940 Female, age 85, left hemisphere 12.0
Hippocampus, CA3
nTPM: 13.8
1867 Male, age 76, both hemispheres 17.4
2436 Male, age 74, both hemispheres 15.8
2620 Female, age 94, left hemisphere 14.2
1891 Female, age 85, both hemispheres 13.8
2137 Male, age 80, left hemisphere 12.5
2861 Female, age 67, both hemispheres 9.3
Parahippocampal cortex
nTPM: 14.2
1850 Male, age 80, both hemispheres 18.3
2018 Male, age 76, both hemispheres 16.8
2245 Female, age 91, both hemispheres 15.2
1933 Female, age 85, both hemispheres 15.0
2250 Female, age 67, right hemisphere 14.7
1990 Female, age 91, right hemisphere 14.0
2532 Female, age 72, left hemisphere 13.7
2693 Female, age 94, both hemispheres 12.7
2622 Female, age 67, right hemisphere 11.5
2692 Male, age 74, both hemispheres 10.5
Perirhinal gyrus
nTPM: 18.9
1794 Male, age 80, right hemisphere 22.6
1841 Female, age 85, right hemisphere 20.9
1847 Female, age 91, left hemisphere 19.8
2521 Female, age 94, right hemisphere 16.5
2848 Male, age 76, right hemisphere 14.6
Subiculum
nTPM: 15.8
2438 Female, age 94, left hemisphere 18.0
1977 Female, age 85, both hemispheres 16.7
2619 Male, age 74, both hemispheres 16.1
1901 Male, age 80, both hemispheres 16.0
2729 Female, age 91, right hemisphere 15.1
2042 Male, age 76, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 80.0
Min nTPM: 19.8
Std nTPM: 9.7
Median nTPM: 41.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 80.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 77.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 71.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 69.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 66.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 66.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 65.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 60.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 59.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.7
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 24.6
Sample A Female 33.2
Sample B Female 27.2
Sample C Male 24.6
Sample D Male 24.8
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 38.0
Min nTPM: 24.9
Sample A Female 38.0
Sample B Female 30.1
Sample C Male 29.9
Sample D Male 24.9
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 24.9
Sample A Female 29.4
Sample B Female 31.9
Sample C Male 28.8
Sample D Male 24.9
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 36.0
Min nTPM: 24.0
Sample A Female 36.0
Sample B Female 24.0
Sample C Male 33.9
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 35.2
Sample A Male 38.1
Sample B Male 43.7
Sample C Female 44.0
Sample D Female 35.2
Hippocampal formation
nTPM: 41.2
Samples: 4

Max nTPM: 52.3
Min nTPM: 32.4
Sample A Male 52.3
Sample B Male 39.1
Sample C Female 32.4
Sample D Female 40.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
556980 Antisense, RP_040825_02_G01, Mouse strain C57BL/6J (56 days, male) 10.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org