HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:28.3 nTPM
HPA Brain:13.7 nTPM
GTEx:28.3 nTPM
FANTOM5:97.8 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:55.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043036Antibody HPA047754Antibody CAB015425
Glial cells LowNot detectedHigh
Neuronal cells MediumLowHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1898 Male, age 80, left hemisphere 16.9
2529 Female, age 94, left hemisphere 14.4
1855 Male, age 76, left hemisphere 13.5
2148 Female, age 91, left hemisphere 12.9
1911 Female, age 85, right hemisphere 12.4
2621 Female, age 67, right hemisphere 12.0
Dentate gyrus
nTPM: 12.4
2010 Male, age 76, both hemispheres 13.8
2530 Female, age 94, left hemisphere 12.9
2246 Female, age 85, both hemispheres 12.4
2531 Female, age 67, both hemispheres 12.4
1927 Female, age 91, both hemispheres 11.9
2528 Male, age 74, both hemispheres 10.8
Entorhinal gyrus
nTPM: 12.4
1787 Male, age 76, left hemisphere 13.6
2764 Male, age 80, right hemisphere 13.4
2117 Female, age 91, right hemisphere 13.0
2686 Male, age 75, right hemisphere 12.7
1938 Female, age 85, left hemisphere 11.9
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 15.2
2527 Male, age 74, both hemispheres 12.4
2045 Male, age 76, both hemispheres 12.3
1873 Female, age 85, both hemispheres 10.5
2082 Female, age 91, right hemisphere 9.8
Hippocampus, CA2
nTPM: 12.9
1892 Male, age 76, both hemispheres 13.9
1940 Female, age 85, left hemisphere 13.6
2437 Female, age 94, left hemisphere 13.6
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.3
1963 Male, age 80, left hemisphere 11.0
Hippocampus, CA3
nTPM: 11.8
2137 Male, age 80, left hemisphere 14.0
2436 Male, age 74, both hemispheres 13.9
1867 Male, age 76, both hemispheres 13.2
1891 Female, age 85, both hemispheres 12.1
2620 Female, age 94, left hemisphere 9.2
2861 Female, age 67, both hemispheres 8.6
Parahippocampal cortex
nTPM: 12.3
2250 Female, age 67, right hemisphere 15.5
2532 Female, age 72, left hemisphere 14.2
1850 Male, age 80, both hemispheres 13.7
2693 Female, age 94, both hemispheres 13.0
1933 Female, age 85, both hemispheres 12.3
1990 Female, age 91, right hemisphere 11.8
2245 Female, age 91, both hemispheres 11.8
2018 Male, age 76, both hemispheres 11.5
2622 Female, age 67, right hemisphere 10.2
2692 Male, age 74, both hemispheres 8.7
Perirhinal gyrus
nTPM: 13.1
1794 Male, age 80, right hemisphere 14.2
1847 Female, age 91, left hemisphere 13.7
1841 Female, age 85, right hemisphere 13.1
2521 Female, age 94, right hemisphere 12.5
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 11.7
1901 Male, age 80, both hemispheres 14.4
1977 Female, age 85, both hemispheres 13.9
2042 Male, age 76, both hemispheres 12.9
2438 Female, age 94, left hemisphere 10.8
2729 Female, age 91, right hemisphere 9.5
2619 Male, age 74, both hemispheres 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 53.8
Min nTPM: 17.9
Std nTPM: 6.1
Median nTPM: 27.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 42.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 41.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 41.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 40.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 40.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.8
FF:10169-103B7 60 years, female 124.6
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 18.3
Sample C Male 16.6
Sample D Male 18.0
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.8
Sample A Female 18.7
Sample B Female 17.8
Sample C Male 19.6
Sample D Male 20.5
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.1
Sample A Female 17.3
Sample B Female 16.7
Sample C Male 16.1
Sample D Male 18.4
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 12.6
Sample A Female 19.2
Sample B Female 18.2
Sample C Male 12.6
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.5
Samples: 4

Max nTPM: 54.5
Min nTPM: 46.0
Sample A Male 48.8
Sample B Male 54.5
Sample C Female 52.7
Sample D Female 46.0
Hippocampal formation
nTPM: 55.6
Samples: 4

Max nTPM: 58.0
Min nTPM: 51.0
Sample A Male 58.0
Sample B Male 51.0
Sample C Female 57.0
Sample D Female 56.3

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