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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.4
nTPM
Monaco:
161.6
nTPM
Schmiedel:
133.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.4
HPA sample
nTPM
gdT-cell nTPM: 90.4
Samples: 6
Max nTPM: 133.0
Min nTPM: 61.1
P10809_1007
61.1
P10809_1022
109.4
P10809_1041
133.0
P10809_1060
71.1
P10809_1077
78.0
P10809_1098
89.8
MAIT T-cell nTPM: 87.0
Samples: 6
Max nTPM: 116.1
Min nTPM: 58.8
P10809_1006
58.8
P10809_1024
116.1
P10809_1043
105.8
P10809_1062
78.0
P10809_1083
75.8
P10809_1097
87.3
Memory CD4 T-cell nTPM: 75.7
Samples: 6
Max nTPM: 92.0
Min nTPM: 60.1
P10809_1014
60.1
P10809_1026
82.2
P10809_1045
92.0
P10809_1064
69.7
P10809_1086
71.1
P10809_1113
78.8
Memory CD8 T-cell nTPM: 81.4
Samples: 5
Max nTPM: 93.8
Min nTPM: 68.8
P10809_1012
68.8
P10809_1027
84.2
P10809_1046
93.8
P10809_1065
73.7
P10809_1111
86.5
Naive CD4 T-cell nTPM: 70.4
Samples: 6
Max nTPM: 93.2
Min nTPM: 47.2
P10809_1015
47.2
P10809_1030
65.5
P10809_1049
93.2
P10809_1068
84.1
P10809_1085
62.0
P10809_1112
70.5
Naive CD8 T-cell nTPM: 70.9
Samples: 6
Max nTPM: 78.9
Min nTPM: 49.9
P10809_1016
49.9
P10809_1031
74.3
P10809_1050
77.3
P10809_1069
77.2
P10809_1087
78.9
P10809_1110
67.5
T-reg nTPM: 84.2
Samples: 6
Max nTPM: 111.7
Min nTPM: 63.2
P10809_1018
63.2
P10809_1037
78.5
P10809_1056
109.0
P10809_1075
111.7
P10809_1094
71.0
P10809_1106
72.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.7
Samples: 4
Max nTPM: 127.3
Min nTPM: 85.2
RHH5202_R3573
111.6
RHH5230_R3602
126.5
RHH5259_R3631
85.2
RHH5288_R3660
127.3
Effector memory CD8 T-cell nTPM: 147.6
Samples: 4
Max nTPM: 177.4
Min nTPM: 111.6
RHH5203_R3574
177.4
RHH5231_R3603
133.4
RHH5260_R3632
111.6
RHH5289_R3661
168.1
MAIT T-cell nTPM: 144.2
Samples: 4
Max nTPM: 174.0
Min nTPM: 117.8
RHH5233_R3605
174.0
RHH5205_R3576
117.8
RHH5262_R3634
157.8
RHH5297_R3663
127.1
Memory CD4 T-cell TFH nTPM: 116.0
Samples: 4
Max nTPM: 130.2
Min nTPM: 106.4
RHH5300_R3666
106.4
RHH5236_R3608
111.4
RHH5265_R3637
115.8
RHH5208_R3579
130.2
Memory CD4 T-cell Th1 nTPM: 106.5
Samples: 4
Max nTPM: 131.9
Min nTPM: 75.1
RHH5210_R3581
100.7
RHH5302_R3668
131.9
RHH5238_R3610
75.1
RHH5267_R3639
118.4
Memory CD4 T-cell Th1/Th17 nTPM: 119.4
Samples: 4
Max nTPM: 157.9
Min nTPM: 66.6
RHH5303_R3669
157.9
RHH5211_R3582
144.0
RHH5239_R3611
66.6
RHH5268_R3640
109.0
Memory CD4 T-cell Th17 nTPM: 111.7
Samples: 4
Max nTPM: 148.0
Min nTPM: 88.2
RHH5304_R3670
148.0
RHH5212_R3583
122.1
RHH5240_R3612
88.4
RHH5269_R3641
88.2
Memory CD4 T-cell Th2 nTPM: 135.3
Samples: 4
Max nTPM: 144.3
Min nTPM: 120.6
RHH5305_R3671
140.5
RHH5213_R3584
144.3
RHH5241_R3613
120.6
RHH5270_R3642
135.9
Naive CD4 T-cell nTPM: 113.7
Samples: 4
Max nTPM: 120.0
Min nTPM: 104.6
RHH5306_R3672
114.4
RHH5214_R3585
104.6
RHH5242_R3614
115.9
RHH5271_R3643
120.0
Naive CD8 T-cell nTPM: 102.7
Samples: 4
Max nTPM: 131.5
Min nTPM: 59.1
RHH5201_R3572
99.4
RHH5229_R3601
59.1
RHH5258_R3630
131.5
RHH5287_R3659
120.9
Non-Vd2 gdTCR nTPM: 161.6
Samples: 4
Max nTPM: 175.3
Min nTPM: 155.5
RHH5235_R3607
155.5
RHH5264_R3636
175.3
RHH5207_R3578
159.6
RHH5299_R3665
156.0
T-reg nTPM: 113.9
Samples: 4
Max nTPM: 119.3
Min nTPM: 106.1
RHH5301_R3667
111.7
RHH5237_R3609
118.5
RHH5266_R3638
119.3
RHH5209_R3580
106.1
Terminal effector memory CD4 T-cell nTPM: 153.6
Samples: 2
Max nTPM: 174.9
Min nTPM: 132.3
RHH5243_R3615
132.3
RHH5272_R3644
174.9
Terminal effector memory CD8 T-cell nTPM: 137.2
Samples: 4
Max nTPM: 171.9
Min nTPM: 120.8
RHH5232_R3604
171.9
RHH5204_R3575
125.8
RHH5261_R3633
120.8
RHH5296_R3662
130.4
Vd2 gdTCR nTPM: 135.0
Samples: 4
Max nTPM: 161.4
Min nTPM: 95.9
RHH5234_R3606
95.9
RHH5206_R3577
161.4
RHH5263_R3635
137.7
RHH5298_R3664
144.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
