HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:23.3 nTPM
HPA Brain:45.0 nTPM
GTEx:23.3 nTPM
FANTOM5:104.4 Scaled Tags Per Million
Mouse:66.0 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060724Antibody CAB006264
Glial cells HighMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.0
Sample id Sample description nTPM
Hippocampus
nTPM: 41.7
1898 Male, age 80, left hemisphere 49.0
1911 Female, age 85, right hemisphere 43.6
2148 Female, age 91, left hemisphere 40.7
2529 Female, age 94, left hemisphere 40.6
1855 Male, age 76, left hemisphere 39.0
2621 Female, age 67, right hemisphere 37.0
Dentate gyrus
nTPM: 41.0
2528 Male, age 74, both hemispheres 46.8
1927 Female, age 91, both hemispheres 46.3
2010 Male, age 76, both hemispheres 42.1
2530 Female, age 94, left hemisphere 38.5
2246 Female, age 85, both hemispheres 38.0
2531 Female, age 67, both hemispheres 34.2
Entorhinal gyrus
nTPM: 41.5
1938 Female, age 85, left hemisphere 54.6
2117 Female, age 91, right hemisphere 47.3
1787 Male, age 76, left hemisphere 40.2
2764 Male, age 80, right hemisphere 37.4
2613 Female, age 94, left hemisphere 35.6
2686 Male, age 75, right hemisphere 33.6
Hippocampus, CA1
nTPM: 42.9
1873 Female, age 85, both hemispheres 46.8
2082 Female, age 91, right hemisphere 43.6
2045 Male, age 76, both hemispheres 42.4
2527 Male, age 74, both hemispheres 41.1
2749 Male, age 80, left hemisphere 40.9
Hippocampus, CA2
nTPM: 43.4
2249 Male, age 74, both hemispheres 48.3
1963 Male, age 80, left hemisphere 44.9
1940 Female, age 85, left hemisphere 43.4
2113 Female, age 91, right hemisphere 43.1
1892 Male, age 76, both hemispheres 41.0
2437 Female, age 94, left hemisphere 39.9
Hippocampus, CA3
nTPM: 41.1
2436 Male, age 74, both hemispheres 51.2
1891 Female, age 85, both hemispheres 47.2
2137 Male, age 80, left hemisphere 43.9
1867 Male, age 76, both hemispheres 39.9
2620 Female, age 94, left hemisphere 37.8
2861 Female, age 67, both hemispheres 26.4
Parahippocampal cortex
nTPM: 41.7
1850 Male, age 80, both hemispheres 48.4
1933 Female, age 85, both hemispheres 46.5
2018 Male, age 76, both hemispheres 45.4
2250 Female, age 67, right hemisphere 45.2
1990 Female, age 91, right hemisphere 44.4
2692 Male, age 74, both hemispheres 41.5
2693 Female, age 94, both hemispheres 41.5
2532 Female, age 72, left hemisphere 36.9
2245 Female, age 91, both hemispheres 33.7
2622 Female, age 67, right hemisphere 33.2
Perirhinal gyrus
nTPM: 45.0
1841 Female, age 85, right hemisphere 50.2
1794 Male, age 80, right hemisphere 47.6
1847 Female, age 91, left hemisphere 44.9
2521 Female, age 94, right hemisphere 42.9
2848 Male, age 76, right hemisphere 39.3
Subiculum
nTPM: 43.2
2729 Female, age 91, right hemisphere 52.0
1977 Female, age 85, both hemispheres 46.9
1901 Male, age 80, both hemispheres 44.6
2042 Male, age 76, both hemispheres 43.8
2619 Male, age 74, both hemispheres 41.5
2438 Female, age 94, left hemisphere 30.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 42.2
Min nTPM: 10.8
Std nTPM: 5.8
Median nTPM: 22.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 42.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 38.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 35.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 33.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 33.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 32.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 32.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.4
FF:10153-102I9 76 years, female 125.8
FF:10169-103B7 60 years, female 83.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.0
Samples: 4

Max nTPM: 68.0
Min nTPM: 56.9
Sample A Male 60.5
Sample B Male 68.0
Sample C Female 66.7
Sample D Female 56.9
Hippocampal formation
nTPM: 66.0
Samples: 4

Max nTPM: 75.1
Min nTPM: 61.3
Sample A Male 75.1
Sample B Male 61.3
Sample C Female 66.2
Sample D Female 61.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69818024 Antisense, RP_050510_04_C05, Mouse strain C57BL/6J (56 days, male) 0.8

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