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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.0
nTPM
Monaco:
207.8
nTPM
Schmiedel:
57.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.0
HPA sample
nTPM
gdT-cell nTPM: 74.5
Samples: 6
Max nTPM: 91.5
Min nTPM: 56.8
P10809_1007
72.5
P10809_1022
91.5
P10809_1041
85.5
P10809_1060
56.8
P10809_1077
69.8
P10809_1098
70.8
MAIT T-cell nTPM: 77.5
Samples: 6
Max nTPM: 91.7
Min nTPM: 55.6
P10809_1006
82.2
P10809_1024
91.7
P10809_1043
87.4
P10809_1062
78.6
P10809_1083
55.6
P10809_1097
69.4
Memory CD4 T-cell nTPM: 69.9
Samples: 6
Max nTPM: 80.3
Min nTPM: 63.9
P10809_1014
80.3
P10809_1026
75.5
P10809_1045
68.4
P10809_1064
64.2
P10809_1086
67.2
P10809_1113
63.9
Memory CD8 T-cell nTPM: 75.1
Samples: 5
Max nTPM: 87.0
Min nTPM: 66.0
P10809_1012
87.0
P10809_1027
80.8
P10809_1046
66.0
P10809_1065
66.9
P10809_1111
75.0
Naive CD4 T-cell nTPM: 61.3
Samples: 6
Max nTPM: 71.9
Min nTPM: 39.0
P10809_1015
67.1
P10809_1030
71.9
P10809_1049
39.0
P10809_1068
62.0
P10809_1085
70.1
P10809_1112
57.8
Naive CD8 T-cell nTPM: 67.4
Samples: 6
Max nTPM: 80.6
Min nTPM: 57.6
P10809_1016
71.2
P10809_1031
70.3
P10809_1050
62.6
P10809_1069
62.0
P10809_1087
80.6
P10809_1110
57.6
T-reg nTPM: 78.0
Samples: 6
Max nTPM: 97.3
Min nTPM: 46.5
P10809_1018
97.3
P10809_1037
92.6
P10809_1056
46.5
P10809_1075
47.6
P10809_1094
94.3
P10809_1106
89.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
207.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 138.3
Samples: 4
Max nTPM: 152.5
Min nTPM: 122.7
RHH5202_R3573
127.5
RHH5230_R3602
122.7
RHH5259_R3631
150.4
RHH5288_R3660
152.5
Effector memory CD8 T-cell nTPM: 207.8
Samples: 4
Max nTPM: 237.3
Min nTPM: 184.2
RHH5203_R3574
237.3
RHH5231_R3603
191.6
RHH5260_R3632
218.0
RHH5289_R3661
184.2
MAIT T-cell nTPM: 172.2
Samples: 4
Max nTPM: 193.2
Min nTPM: 153.9
RHH5233_R3605
175.7
RHH5205_R3576
193.2
RHH5262_R3634
153.9
RHH5297_R3663
166.1
Memory CD4 T-cell TFH nTPM: 148.9
Samples: 4
Max nTPM: 178.5
Min nTPM: 131.0
RHH5300_R3666
132.0
RHH5236_R3608
131.0
RHH5265_R3637
153.9
RHH5208_R3579
178.5
Memory CD4 T-cell Th1 nTPM: 158.2
Samples: 4
Max nTPM: 181.7
Min nTPM: 131.9
RHH5210_R3581
176.4
RHH5302_R3668
131.9
RHH5238_R3610
142.6
RHH5267_R3639
181.7
Memory CD4 T-cell Th1/Th17 nTPM: 175.2
Samples: 4
Max nTPM: 193.6
Min nTPM: 154.9
RHH5303_R3669
167.4
RHH5211_R3582
193.6
RHH5239_R3611
185.0
RHH5268_R3640
154.9
Memory CD4 T-cell Th17 nTPM: 186.8
Samples: 4
Max nTPM: 201.0
Min nTPM: 164.3
RHH5304_R3670
187.1
RHH5212_R3583
164.3
RHH5240_R3612
201.0
RHH5269_R3641
194.8
Memory CD4 T-cell Th2 nTPM: 173.6
Samples: 4
Max nTPM: 189.0
Min nTPM: 162.0
RHH5305_R3671
162.0
RHH5213_R3584
189.0
RHH5241_R3613
171.9
RHH5270_R3642
171.6
Naive CD4 T-cell nTPM: 134.7
Samples: 4
Max nTPM: 167.1
Min nTPM: 115.1
RHH5306_R3672
129.4
RHH5214_R3585
115.1
RHH5242_R3614
127.2
RHH5271_R3643
167.1
Naive CD8 T-cell nTPM: 150.0
Samples: 4
Max nTPM: 177.1
Min nTPM: 119.3
RHH5201_R3572
177.1
RHH5229_R3601
119.3
RHH5258_R3630
137.5
RHH5287_R3659
166.1
Non-Vd2 gdTCR nTPM: 197.6
Samples: 4
Max nTPM: 229.5
Min nTPM: 150.7
RHH5235_R3607
192.9
RHH5264_R3636
229.5
RHH5207_R3578
217.2
RHH5299_R3665
150.7
T-reg nTPM: 151.5
Samples: 4
Max nTPM: 170.8
Min nTPM: 126.4
RHH5301_R3667
126.4
RHH5237_R3609
170.8
RHH5266_R3638
142.5
RHH5209_R3580
166.1
Terminal effector memory CD4 T-cell nTPM: 166.2
Samples: 2
Max nTPM: 171.4
Min nTPM: 161.0
RHH5243_R3615
161.0
RHH5272_R3644
171.4
Terminal effector memory CD8 T-cell nTPM: 192.9
Samples: 4
Max nTPM: 221.2
Min nTPM: 176.5
RHH5232_R3604
184.0
RHH5204_R3575
176.5
RHH5261_R3633
221.2
RHH5296_R3662
190.0
Vd2 gdTCR nTPM: 179.7
Samples: 4
Max nTPM: 202.1
Min nTPM: 152.7
RHH5234_R3606
170.2
RHH5206_R3577
202.1
RHH5263_R3635
193.8
RHH5298_R3664
152.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
