HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.0 nTPM
HPA Brain:29.7 nTPM
GTEx:53.0 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:2.2 nTPM
Mouse:28.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038829
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
2529 Female, age 94, left hemisphere 37.9
2621 Female, age 67, right hemisphere 32.0
1911 Female, age 85, right hemisphere 29.2
1898 Male, age 80, left hemisphere 27.5
2148 Female, age 91, left hemisphere 25.2
1855 Male, age 76, left hemisphere 24.9
Dentate gyrus
nTPM: 27.8
2530 Female, age 94, left hemisphere 43.3
2010 Male, age 76, both hemispheres 29.0
1927 Female, age 91, both hemispheres 28.4
2528 Male, age 74, both hemispheres 25.3
2246 Female, age 85, both hemispheres 20.5
2531 Female, age 67, both hemispheres 19.9
Entorhinal gyrus
nTPM: 29.7
2117 Female, age 91, right hemisphere 34.4
1787 Male, age 76, left hemisphere 33.0
2764 Male, age 80, right hemisphere 29.4
1938 Female, age 85, left hemisphere 27.6
2613 Female, age 94, left hemisphere 27.5
2686 Male, age 75, right hemisphere 26.2
Hippocampus, CA1
nTPM: 27.3
2749 Male, age 80, left hemisphere 45.9
2527 Male, age 74, both hemispheres 30.5
1873 Female, age 85, both hemispheres 24.7
2045 Male, age 76, both hemispheres 17.9
2082 Female, age 91, right hemisphere 17.7
Hippocampus, CA2
nTPM: 27.0
1963 Male, age 80, left hemisphere 50.5
2437 Female, age 94, left hemisphere 32.2
2249 Male, age 74, both hemispheres 24.3
1892 Male, age 76, both hemispheres 23.0
2113 Female, age 91, right hemisphere 16.2
1940 Female, age 85, left hemisphere 15.6
Hippocampus, CA3
nTPM: 25.8
2861 Female, age 67, both hemispheres 31.4
2436 Male, age 74, both hemispheres 30.9
2137 Male, age 80, left hemisphere 28.1
1867 Male, age 76, both hemispheres 21.9
1891 Female, age 85, both hemispheres 21.6
2620 Female, age 94, left hemisphere 21.0
Parahippocampal cortex
nTPM: 22.5
2692 Male, age 74, both hemispheres 33.0
1990 Female, age 91, right hemisphere 24.3
2018 Male, age 76, both hemispheres 23.4
2245 Female, age 91, both hemispheres 23.4
1933 Female, age 85, both hemispheres 23.1
2622 Female, age 67, right hemisphere 21.9
2532 Female, age 72, left hemisphere 21.8
1850 Male, age 80, both hemispheres 19.7
2250 Female, age 67, right hemisphere 19.3
2693 Female, age 94, both hemispheres 15.3
Perirhinal gyrus
nTPM: 19.3
1847 Female, age 91, left hemisphere 22.7
1794 Male, age 80, right hemisphere 22.0
1841 Female, age 85, right hemisphere 18.1
2848 Male, age 76, right hemisphere 17.6
2521 Female, age 94, right hemisphere 15.8
Subiculum
nTPM: 24.7
2619 Male, age 74, both hemispheres 32.9
1901 Male, age 80, both hemispheres 31.3
2042 Male, age 76, both hemispheres 31.0
1977 Female, age 85, both hemispheres 25.1
2729 Female, age 91, right hemisphere 22.4
2438 Female, age 94, left hemisphere 5.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.0
Samples: 197

Max nTPM: 122.5
Min nTPM: 13.2
Std nTPM: 19.9
Median nTPM: 49.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 122.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 110.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 110.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 106.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 106.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 98.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 95.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 91.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 90.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 89.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10153-102I9 76 years, female 30.5
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.2
Pig sample Sample description nTPM
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.5
Sample A Female 2.6
Sample B Female 1.8
Sample C Male 1.5
Sample D Male 2.3
Dorsal hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.2
Sample A Female 2.8
Sample B Female 2.4
Sample C Male 2.3
Sample D Male 1.2
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 1.9
Sample C Male 2.5
Sample D Male 1.8
Ventral hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.6
Sample A Female 1.8
Sample B Female 2.6
Sample C Male 2.6
Sample D Male 1.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 26.4
Min nTPM: 19.2
Sample A Male 22.4
Sample B Male 26.4
Sample C Female 19.2
Sample D Female 25.0
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 30.5
Min nTPM: 23.0
Sample A Male 29.7
Sample B Male 23.0
Sample C Female 30.5
Sample D Female 29.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69202794 Antisense, RP_050324_04_D06, Mouse strain C57BL/6J (56 days, male) 2.5
70812972 Antisense, RP_050712_02_H08, Mouse strain C57BL/6J (56 days, male) 0.6

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