HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:110.8 nTPM
HPA Brain:165.7 nTPM
GTEx:110.8 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:75.4 nTPM
Mouse:114.0 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011917Antibody HPA075970
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.7
Sample id Sample description nTPM
Hippocampus
nTPM: 118.9
1898 Male, age 80, left hemisphere 137.8
1911 Female, age 85, right hemisphere 122.6
2621 Female, age 67, right hemisphere 120.8
2148 Female, age 91, left hemisphere 115.9
2529 Female, age 94, left hemisphere 108.5
1855 Male, age 76, left hemisphere 108.1
Dentate gyrus
nTPM: 138.1
2531 Female, age 67, both hemispheres 169.8
2530 Female, age 94, left hemisphere 159.2
2246 Female, age 85, both hemispheres 136.3
2528 Male, age 74, both hemispheres 125.6
1927 Female, age 91, both hemispheres 119.2
2010 Male, age 76, both hemispheres 118.4
Entorhinal gyrus
nTPM: 165.7
2613 Female, age 94, left hemisphere 195.9
2764 Male, age 80, right hemisphere 192.0
1787 Male, age 76, left hemisphere 164.2
2117 Female, age 91, right hemisphere 154.1
1938 Female, age 85, left hemisphere 149.5
2686 Male, age 75, right hemisphere 138.3
Hippocampus, CA1
nTPM: 121.7
2045 Male, age 76, both hemispheres 135.8
1873 Female, age 85, both hemispheres 124.7
2749 Male, age 80, left hemisphere 118.9
2082 Female, age 91, right hemisphere 117.4
2527 Male, age 74, both hemispheres 111.9
Hippocampus, CA2
nTPM: 122.7
2437 Female, age 94, left hemisphere 139.6
1963 Male, age 80, left hemisphere 125.0
1892 Male, age 76, both hemispheres 122.4
1940 Female, age 85, left hemisphere 122.4
2249 Male, age 74, both hemispheres 116.3
2113 Female, age 91, right hemisphere 110.7
Hippocampus, CA3
nTPM: 135.9
2620 Female, age 94, left hemisphere 219.9
1891 Female, age 85, both hemispheres 144.8
2861 Female, age 67, both hemispheres 134.4
1867 Male, age 76, both hemispheres 116.2
2137 Male, age 80, left hemisphere 114.2
2436 Male, age 74, both hemispheres 85.6
Parahippocampal cortex
nTPM: 140.0
1990 Female, age 91, right hemisphere 157.8
2532 Female, age 72, left hemisphere 156.0
2693 Female, age 94, both hemispheres 153.0
1850 Male, age 80, both hemispheres 151.2
1933 Female, age 85, both hemispheres 143.3
2245 Female, age 91, both hemispheres 140.0
2622 Female, age 67, right hemisphere 136.6
2692 Male, age 74, both hemispheres 125.8
2018 Male, age 76, both hemispheres 119.2
2250 Female, age 67, right hemisphere 116.7
Perirhinal gyrus
nTPM: 157.3
1794 Male, age 80, right hemisphere 182.3
2848 Male, age 76, right hemisphere 158.4
2521 Female, age 94, right hemisphere 151.5
1847 Female, age 91, left hemisphere 148.9
1841 Female, age 85, right hemisphere 145.2
Subiculum
nTPM: 134.4
1977 Female, age 85, both hemispheres 175.3
2042 Male, age 76, both hemispheres 142.8
1901 Male, age 80, both hemispheres 140.5
2619 Male, age 74, both hemispheres 124.2
2729 Female, age 91, right hemisphere 117.7
2438 Female, age 94, left hemisphere 105.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.8
Samples: 197

Max nTPM: 237.3
Min nTPM: 34.5
Std nTPM: 33.2
Median nTPM: 109.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 237.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 216.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 213.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 203.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 199.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 183.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 178.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 178.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 169.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 161.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 156.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.3
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 67.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.4
Pig sample Sample description nTPM
Subiculum
nTPM: 44.4
Samples: 4

Max nTPM: 61.3
Min nTPM: 32.4
Sample A Female 61.3
Sample B Female 37.8
Sample C Male 45.9
Sample D Male 32.4
Dorsal hippocampus
nTPM: 75.4
Samples: 4

Max nTPM: 104.3
Min nTPM: 55.5
Sample A Female 104.3
Sample B Female 73.2
Sample C Male 68.6
Sample D Male 55.5
Entorhinal cortex
nTPM: 47.1
Samples: 4

Max nTPM: 55.5
Min nTPM: 43.2
Sample A Female 55.5
Sample B Female 45.5
Sample C Male 44.3
Sample D Male 43.2
Ventral hippocampus
nTPM: 60.3
Samples: 4

Max nTPM: 70.5
Min nTPM: 39.1
Sample A Female 63.3
Sample B Female 39.1
Sample C Male 70.5
Sample D Male 68.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.1
Samples: 4

Max nTPM: 119.1
Min nTPM: 106.0
Sample A Male 119.1
Sample B Male 118.0
Sample C Female 106.0
Sample D Female 113.1
Hippocampal formation
nTPM: 107.4
Samples: 4

Max nTPM: 120.1
Min nTPM: 93.3
Sample A Male 93.3
Sample B Male 108.4
Sample C Female 107.9
Sample D Female 120.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
68797507 Antisense, RP_050210_02_D01, Mouse strain C57BL/6J (56 days, male) 15.2

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