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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.3
nTPM
Monaco:
345.0
nTPM
Schmiedel:
218.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.3
HPA sample
nTPM
gdT-cell nTPM: 56.2
Samples: 6
Max nTPM: 62.2
Min nTPM: 51.2
P10809_1007
56.4
P10809_1022
59.3
P10809_1041
51.2
P10809_1060
56.0
P10809_1077
62.2
P10809_1098
51.9
MAIT T-cell nTPM: 38.9
Samples: 6
Max nTPM: 63.0
Min nTPM: 22.5
P10809_1006
63.0
P10809_1024
53.0
P10809_1043
28.2
P10809_1062
37.2
P10809_1083
22.5
P10809_1097
29.3
Memory CD4 T-cell nTPM: 35.6
Samples: 6
Max nTPM: 46.1
Min nTPM: 27.0
P10809_1014
42.1
P10809_1026
30.3
P10809_1045
29.4
P10809_1064
38.8
P10809_1086
46.1
P10809_1113
27.0
Memory CD8 T-cell nTPM: 71.3
Samples: 5
Max nTPM: 83.4
Min nTPM: 56.3
P10809_1012
71.8
P10809_1027
83.4
P10809_1046
56.3
P10809_1065
82.5
P10809_1111
62.4
Naive CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 29.4
Min nTPM: 10.1
P10809_1015
28.8
P10809_1030
17.9
P10809_1049
10.1
P10809_1068
18.7
P10809_1085
29.4
P10809_1112
12.3
Naive CD8 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 69.4
Min nTPM: 20.2
P10809_1016
28.5
P10809_1031
25.7
P10809_1050
35.0
P10809_1069
58.2
P10809_1087
69.4
P10809_1110
20.2
T-reg nTPM: 45.7
Samples: 6
Max nTPM: 54.2
Min nTPM: 35.0
P10809_1018
46.4
P10809_1037
35.0
P10809_1056
44.4
P10809_1075
49.7
P10809_1094
54.2
P10809_1106
44.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
345.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.4
Samples: 4
Max nTPM: 215.0
Min nTPM: 82.7
RHH5202_R3573
173.3
RHH5230_R3602
82.7
RHH5259_R3631
198.5
RHH5288_R3660
215.0
Effector memory CD8 T-cell nTPM: 345.0
Samples: 4
Max nTPM: 384.4
Min nTPM: 288.1
RHH5203_R3574
331.1
RHH5231_R3603
288.1
RHH5260_R3632
384.4
RHH5289_R3661
376.4
MAIT T-cell nTPM: 162.0
Samples: 4
Max nTPM: 174.8
Min nTPM: 150.5
RHH5233_R3605
162.8
RHH5205_R3576
159.8
RHH5262_R3634
174.8
RHH5297_R3663
150.5
Memory CD4 T-cell TFH nTPM: 159.5
Samples: 4
Max nTPM: 174.7
Min nTPM: 141.8
RHH5300_R3666
170.1
RHH5236_R3608
141.8
RHH5265_R3637
151.4
RHH5208_R3579
174.7
Memory CD4 T-cell Th1 nTPM: 147.7
Samples: 4
Max nTPM: 178.9
Min nTPM: 99.8
RHH5210_R3581
99.8
RHH5302_R3668
142.8
RHH5238_R3610
178.9
RHH5267_R3639
169.4
Memory CD4 T-cell Th1/Th17 nTPM: 153.2
Samples: 4
Max nTPM: 164.8
Min nTPM: 132.7
RHH5303_R3669
162.6
RHH5211_R3582
164.8
RHH5239_R3611
152.8
RHH5268_R3640
132.7
Memory CD4 T-cell Th17 nTPM: 148.5
Samples: 4
Max nTPM: 181.2
Min nTPM: 113.7
RHH5304_R3670
169.3
RHH5212_R3583
129.7
RHH5240_R3612
181.2
RHH5269_R3641
113.7
Memory CD4 T-cell Th2 nTPM: 135.2
Samples: 4
Max nTPM: 165.0
Min nTPM: 85.6
RHH5305_R3671
165.0
RHH5213_R3584
141.2
RHH5241_R3613
85.6
RHH5270_R3642
149.1
Naive CD4 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 124.7
Min nTPM: 63.9
RHH5306_R3672
124.7
RHH5214_R3585
88.7
RHH5242_R3614
74.2
RHH5271_R3643
63.9
Naive CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 132.3
Min nTPM: 79.2
RHH5201_R3572
79.2
RHH5229_R3601
132.3
RHH5258_R3630
100.0
RHH5287_R3659
111.1
Non-Vd2 gdTCR nTPM: 283.2
Samples: 4
Max nTPM: 321.1
Min nTPM: 239.7
RHH5235_R3607
260.8
RHH5264_R3636
321.1
RHH5207_R3578
311.0
RHH5299_R3665
239.7
T-reg nTPM: 137.9
Samples: 4
Max nTPM: 154.2
Min nTPM: 126.4
RHH5301_R3667
133.4
RHH5237_R3609
137.4
RHH5266_R3638
154.2
RHH5209_R3580
126.4
Terminal effector memory CD4 T-cell nTPM: 248.5
Samples: 2
Max nTPM: 256.8
Min nTPM: 240.1
RHH5243_R3615
240.1
RHH5272_R3644
256.8
Terminal effector memory CD8 T-cell nTPM: 306.8
Samples: 4
Max nTPM: 364.0
Min nTPM: 265.1
RHH5232_R3604
290.5
RHH5204_R3575
265.1
RHH5261_R3633
364.0
RHH5296_R3662
307.7
Vd2 gdTCR nTPM: 185.5
Samples: 4
Max nTPM: 247.7
Min nTPM: 146.8
RHH5234_R3606
146.8
RHH5206_R3577
192.1
RHH5263_R3635
247.7
RHH5298_R3664
155.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
