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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
266.2
nTPM
Monaco:
366.9
nTPM
Schmiedel:
222.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
266.2
HPA sample
nTPM
gdT-cell nTPM: 237.2
Samples: 6
Max nTPM: 327.1
Min nTPM: 167.4
P10809_1007
222.3
P10809_1022
327.1
P10809_1041
229.9
P10809_1060
212.9
P10809_1077
167.4
P10809_1098
263.7
MAIT T-cell nTPM: 204.6
Samples: 6
Max nTPM: 277.3
Min nTPM: 133.0
P10809_1006
239.7
P10809_1024
277.3
P10809_1043
195.7
P10809_1062
200.8
P10809_1083
133.0
P10809_1097
181.3
Memory CD4 T-cell nTPM: 172.4
Samples: 6
Max nTPM: 203.1
Min nTPM: 139.9
P10809_1014
173.1
P10809_1026
203.1
P10809_1045
196.9
P10809_1064
152.9
P10809_1086
139.9
P10809_1113
168.7
Memory CD8 T-cell nTPM: 243.8
Samples: 5
Max nTPM: 294.2
Min nTPM: 202.0
P10809_1012
235.9
P10809_1027
256.6
P10809_1046
230.3
P10809_1065
202.0
P10809_1111
294.2
Naive CD4 T-cell nTPM: 266.2
Samples: 6
Max nTPM: 310.3
Min nTPM: 223.7
P10809_1015
256.9
P10809_1030
310.3
P10809_1049
281.6
P10809_1068
271.4
P10809_1085
223.7
P10809_1112
253.0
Naive CD8 T-cell nTPM: 257.6
Samples: 6
Max nTPM: 325.8
Min nTPM: 171.7
P10809_1016
263.9
P10809_1031
325.8
P10809_1050
267.9
P10809_1069
252.2
P10809_1087
171.7
P10809_1110
263.8
T-reg nTPM: 79.7
Samples: 6
Max nTPM: 100.3
Min nTPM: 62.9
P10809_1018
76.0
P10809_1037
85.4
P10809_1056
77.8
P10809_1075
100.3
P10809_1094
62.9
P10809_1106
75.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
366.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 337.1
Samples: 4
Max nTPM: 352.5
Min nTPM: 317.5
RHH5202_R3573
339.0
RHH5230_R3602
352.5
RHH5259_R3631
339.3
RHH5288_R3660
317.5
Effector memory CD8 T-cell nTPM: 327.5
Samples: 4
Max nTPM: 459.2
Min nTPM: 221.4
RHH5203_R3574
459.2
RHH5231_R3603
221.4
RHH5260_R3632
316.6
RHH5289_R3661
312.9
MAIT T-cell nTPM: 297.6
Samples: 4
Max nTPM: 335.5
Min nTPM: 263.4
RHH5233_R3605
268.3
RHH5205_R3576
335.5
RHH5262_R3634
323.2
RHH5297_R3663
263.4
Memory CD4 T-cell TFH nTPM: 309.4
Samples: 4
Max nTPM: 332.6
Min nTPM: 288.4
RHH5300_R3666
288.4
RHH5236_R3608
288.9
RHH5265_R3637
332.6
RHH5208_R3579
327.6
Memory CD4 T-cell Th1 nTPM: 284.6
Samples: 4
Max nTPM: 349.5
Min nTPM: 198.0
RHH5210_R3581
349.5
RHH5302_R3668
279.6
RHH5238_R3610
198.0
RHH5267_R3639
311.4
Memory CD4 T-cell Th1/Th17 nTPM: 259.6
Samples: 4
Max nTPM: 270.7
Min nTPM: 253.4
RHH5303_R3669
259.5
RHH5211_R3582
270.7
RHH5239_R3611
253.4
RHH5268_R3640
254.9
Memory CD4 T-cell Th17 nTPM: 234.6
Samples: 4
Max nTPM: 256.5
Min nTPM: 203.3
RHH5304_R3670
256.5
RHH5212_R3583
203.3
RHH5240_R3612
246.1
RHH5269_R3641
232.6
Memory CD4 T-cell Th2 nTPM: 244.2
Samples: 4
Max nTPM: 297.3
Min nTPM: 194.7
RHH5305_R3671
246.0
RHH5213_R3584
297.3
RHH5241_R3613
194.7
RHH5270_R3642
238.9
Naive CD4 T-cell nTPM: 344.0
Samples: 4
Max nTPM: 393.5
Min nTPM: 298.8
RHH5306_R3672
339.0
RHH5214_R3585
344.6
RHH5242_R3614
298.8
RHH5271_R3643
393.5
Naive CD8 T-cell nTPM: 366.9
Samples: 4
Max nTPM: 388.6
Min nTPM: 317.3
RHH5201_R3572
375.5
RHH5229_R3601
317.3
RHH5258_R3630
386.2
RHH5287_R3659
388.6
Non-Vd2 gdTCR nTPM: 283.6
Samples: 4
Max nTPM: 303.8
Min nTPM: 274.7
RHH5235_R3607
303.8
RHH5264_R3636
276.3
RHH5207_R3578
279.4
RHH5299_R3665
274.7
T-reg nTPM: 213.5
Samples: 4
Max nTPM: 232.6
Min nTPM: 182.3
RHH5301_R3667
182.3
RHH5237_R3609
215.8
RHH5266_R3638
232.6
RHH5209_R3580
223.1
Terminal effector memory CD4 T-cell nTPM: 279.4
Samples: 2
Max nTPM: 279.8
Min nTPM: 278.9
RHH5243_R3615
279.8
RHH5272_R3644
278.9
Terminal effector memory CD8 T-cell nTPM: 280.3
Samples: 4
Max nTPM: 362.2
Min nTPM: 226.8
RHH5232_R3604
278.4
RHH5204_R3575
362.2
RHH5261_R3633
226.8
RHH5296_R3662
253.7
Vd2 gdTCR nTPM: 308.4
Samples: 4
Max nTPM: 323.8
Min nTPM: 283.5
RHH5234_R3606
323.8
RHH5206_R3577
283.5
RHH5263_R3635
320.7
RHH5298_R3664
305.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.