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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
689.6
nTPM
Monaco:
1136.1
nTPM
Schmiedel:
858.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
689.6
HPA sample
nTPM
gdT-cell nTPM: 209.8
Samples: 6
Max nTPM: 286.0
Min nTPM: 165.5
P10809_1007
186.5
P10809_1022
216.1
P10809_1041
286.0
P10809_1060
221.5
P10809_1077
165.5
P10809_1098
183.3
MAIT T-cell nTPM: 277.5
Samples: 6
Max nTPM: 311.0
Min nTPM: 201.1
P10809_1006
300.2
P10809_1024
298.6
P10809_1043
311.0
P10809_1062
300.3
P10809_1083
201.1
P10809_1097
253.5
Memory CD4 T-cell nTPM: 280.9
Samples: 6
Max nTPM: 358.0
Min nTPM: 169.6
P10809_1014
358.0
P10809_1026
355.7
P10809_1045
319.0
P10809_1064
209.2
P10809_1086
169.6
P10809_1113
273.9
Memory CD8 T-cell nTPM: 266.3
Samples: 5
Max nTPM: 350.2
Min nTPM: 170.2
P10809_1012
350.2
P10809_1027
316.8
P10809_1046
250.4
P10809_1065
170.2
P10809_1111
243.9
Naive CD4 T-cell nTPM: 484.8
Samples: 6
Max nTPM: 606.6
Min nTPM: 356.1
P10809_1015
494.9
P10809_1030
399.2
P10809_1049
606.6
P10809_1068
575.8
P10809_1085
356.1
P10809_1112
476.4
Naive CD8 T-cell nTPM: 337.0
Samples: 6
Max nTPM: 477.0
Min nTPM: 145.3
P10809_1016
477.0
P10809_1031
336.2
P10809_1050
342.7
P10809_1069
368.0
P10809_1087
145.3
P10809_1110
352.8
T-reg nTPM: 689.6
Samples: 6
Max nTPM: 782.4
Min nTPM: 592.0
P10809_1018
742.6
P10809_1037
664.7
P10809_1056
740.0
P10809_1075
592.0
P10809_1094
782.4
P10809_1106
615.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1136.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 642.4
Samples: 4
Max nTPM: 762.1
Min nTPM: 498.9
RHH5202_R3573
685.2
RHH5230_R3602
623.2
RHH5259_R3631
498.9
RHH5288_R3660
762.1
Effector memory CD8 T-cell nTPM: 537.5
Samples: 4
Max nTPM: 700.7
Min nTPM: 434.3
RHH5203_R3574
700.7
RHH5231_R3603
488.1
RHH5260_R3632
526.8
RHH5289_R3661
434.3
MAIT T-cell nTPM: 570.4
Samples: 4
Max nTPM: 673.1
Min nTPM: 482.4
RHH5233_R3605
673.1
RHH5205_R3576
482.4
RHH5262_R3634
540.5
RHH5297_R3663
585.7
Memory CD4 T-cell TFH nTPM: 1010.4
Samples: 4
Max nTPM: 1274.4
Min nTPM: 864.4
RHH5300_R3666
933.7
RHH5236_R3608
1274.4
RHH5265_R3637
864.4
RHH5208_R3579
969.1
Memory CD4 T-cell Th1 nTPM: 756.1
Samples: 4
Max nTPM: 923.3
Min nTPM: 579.3
RHH5210_R3581
923.3
RHH5302_R3668
882.2
RHH5238_R3610
579.3
RHH5267_R3639
639.6
Memory CD4 T-cell Th1/Th17 nTPM: 523.4
Samples: 4
Max nTPM: 663.4
Min nTPM: 445.7
RHH5303_R3669
534.7
RHH5211_R3582
663.4
RHH5239_R3611
449.8
RHH5268_R3640
445.7
Memory CD4 T-cell Th17 nTPM: 602.1
Samples: 4
Max nTPM: 658.4
Min nTPM: 442.1
RHH5304_R3670
658.4
RHH5212_R3583
652.5
RHH5240_R3612
655.3
RHH5269_R3641
442.1
Memory CD4 T-cell Th2 nTPM: 609.8
Samples: 4
Max nTPM: 663.4
Min nTPM: 509.5
RHH5305_R3671
663.4
RHH5213_R3584
623.2
RHH5241_R3613
643.0
RHH5270_R3642
509.5
Naive CD4 T-cell nTPM: 1136.1
Samples: 4
Max nTPM: 1248.0
Min nTPM: 952.5
RHH5306_R3672
1229.3
RHH5214_R3585
1248.0
RHH5242_R3614
1114.6
RHH5271_R3643
952.5
Naive CD8 T-cell nTPM: 825.5
Samples: 4
Max nTPM: 1050.3
Min nTPM: 542.5
RHH5201_R3572
542.5
RHH5229_R3601
832.9
RHH5258_R3630
876.4
RHH5287_R3659
1050.3
Non-Vd2 gdTCR nTPM: 683.6
Samples: 4
Max nTPM: 800.4
Min nTPM: 576.6
RHH5235_R3607
576.6
RHH5264_R3636
768.7
RHH5207_R3578
800.4
RHH5299_R3665
588.5
T-reg nTPM: 1080.9
Samples: 4
Max nTPM: 1294.2
Min nTPM: 885.3
RHH5301_R3667
1086.3
RHH5237_R3609
1294.2
RHH5266_R3638
885.3
RHH5209_R3580
1057.7
Terminal effector memory CD4 T-cell nTPM: 416.0
Samples: 2
Max nTPM: 518.8
Min nTPM: 313.1
RHH5243_R3615
313.1
RHH5272_R3644
518.8
Terminal effector memory CD8 T-cell nTPM: 550.4
Samples: 4
Max nTPM: 612.3
Min nTPM: 466.5
RHH5232_R3604
534.0
RHH5204_R3575
612.3
RHH5261_R3633
588.8
RHH5296_R3662
466.5
Vd2 gdTCR nTPM: 598.1
Samples: 4
Max nTPM: 694.0
Min nTPM: 454.3
RHH5234_R3606
694.0
RHH5206_R3577
454.3
RHH5263_R3635
643.0
RHH5298_R3664
601.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.