We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
106.8
nTPM
Monaco:
440.9
nTPM
Schmiedel:
300.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.8
HPA sample
nTPM
gdT-cell nTPM: 106.9
Samples: 6
Max nTPM: 141.2
Min nTPM: 79.1
P10809_1007
85.0
P10809_1022
123.4
P10809_1041
141.2
P10809_1060
95.7
P10809_1077
116.7
P10809_1098
79.1
MAIT T-cell nTPM: 89.9
Samples: 6
Max nTPM: 116.5
Min nTPM: 69.9
P10809_1006
116.5
P10809_1024
79.1
P10809_1043
99.6
P10809_1062
69.9
P10809_1083
81.8
P10809_1097
92.6
Memory CD4 T-cell nTPM: 72.8
Samples: 6
Max nTPM: 94.9
Min nTPM: 44.1
P10809_1014
67.3
P10809_1026
60.8
P10809_1045
94.9
P10809_1064
92.0
P10809_1086
77.6
P10809_1113
44.1
Memory CD8 T-cell nTPM: 103.2
Samples: 5
Max nTPM: 126.5
Min nTPM: 85.8
P10809_1012
94.9
P10809_1027
85.8
P10809_1046
126.5
P10809_1065
111.0
P10809_1111
97.6
Naive CD4 T-cell nTPM: 22.9
Samples: 6
Max nTPM: 37.3
Min nTPM: 14.0
P10809_1015
19.9
P10809_1030
19.9
P10809_1049
30.4
P10809_1068
14.0
P10809_1085
37.3
P10809_1112
15.6
Naive CD8 T-cell nTPM: 62.3
Samples: 6
Max nTPM: 93.8
Min nTPM: 23.6
P10809_1016
23.6
P10809_1031
70.6
P10809_1050
66.5
P10809_1069
75.8
P10809_1087
93.8
P10809_1110
43.7
T-reg nTPM: 81.9
Samples: 6
Max nTPM: 110.5
Min nTPM: 62.8
P10809_1018
68.7
P10809_1037
108.9
P10809_1056
110.5
P10809_1075
64.6
P10809_1094
62.8
P10809_1106
75.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
440.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 191.2
Samples: 4
Max nTPM: 284.4
Min nTPM: 103.7
RHH5202_R3573
103.7
RHH5230_R3602
240.0
RHH5259_R3631
284.4
RHH5288_R3660
136.8
Effector memory CD8 T-cell nTPM: 339.4
Samples: 4
Max nTPM: 433.6
Min nTPM: 268.4
RHH5203_R3574
293.6
RHH5231_R3603
361.8
RHH5260_R3632
433.6
RHH5289_R3661
268.4
MAIT T-cell nTPM: 258.2
Samples: 4
Max nTPM: 346.8
Min nTPM: 205.5
RHH5233_R3605
207.0
RHH5205_R3576
346.8
RHH5262_R3634
273.4
RHH5297_R3663
205.5
Memory CD4 T-cell TFH nTPM: 134.2
Samples: 4
Max nTPM: 220.7
Min nTPM: 45.4
RHH5300_R3666
147.7
RHH5236_R3608
220.7
RHH5265_R3637
122.8
RHH5208_R3579
45.4
Memory CD4 T-cell Th1 nTPM: 210.0
Samples: 4
Max nTPM: 336.5
Min nTPM: 114.9
RHH5210_R3581
114.9
RHH5302_R3668
134.5
RHH5238_R3610
336.5
RHH5267_R3639
254.2
Memory CD4 T-cell Th1/Th17 nTPM: 266.0
Samples: 4
Max nTPM: 349.0
Min nTPM: 130.3
RHH5303_R3669
130.3
RHH5211_R3582
307.7
RHH5239_R3611
349.0
RHH5268_R3640
276.8
Memory CD4 T-cell Th17 nTPM: 264.8
Samples: 4
Max nTPM: 337.2
Min nTPM: 180.7
RHH5304_R3670
180.7
RHH5212_R3583
337.2
RHH5240_R3612
228.1
RHH5269_R3641
313.2
Memory CD4 T-cell Th2 nTPM: 202.2
Samples: 4
Max nTPM: 272.5
Min nTPM: 130.1
RHH5305_R3671
169.9
RHH5213_R3584
272.5
RHH5241_R3613
130.1
RHH5270_R3642
236.1
Naive CD4 T-cell nTPM: 67.0
Samples: 4
Max nTPM: 78.9
Min nTPM: 56.9
RHH5306_R3672
60.0
RHH5214_R3585
72.1
RHH5242_R3614
78.9
RHH5271_R3643
56.9
Naive CD8 T-cell nTPM: 63.5
Samples: 4
Max nTPM: 101.4
Min nTPM: 20.4
RHH5201_R3572
20.4
RHH5229_R3601
101.4
RHH5258_R3630
65.7
RHH5287_R3659
66.3
Non-Vd2 gdTCR nTPM: 392.2
Samples: 4
Max nTPM: 535.0
Min nTPM: 314.6
RHH5235_R3607
535.0
RHH5264_R3636
314.6
RHH5207_R3578
338.7
RHH5299_R3665
380.4
T-reg nTPM: 209.2
Samples: 4
Max nTPM: 256.3
Min nTPM: 160.9
RHH5301_R3667
160.9
RHH5237_R3609
256.3
RHH5266_R3638
197.3
RHH5209_R3580
222.4
Terminal effector memory CD4 T-cell nTPM: 440.9
Samples: 2
Max nTPM: 582.3
Min nTPM: 299.5
RHH5243_R3615
582.3
RHH5272_R3644
299.5
Terminal effector memory CD8 T-cell nTPM: 390.9
Samples: 4
Max nTPM: 545.3
Min nTPM: 251.8
RHH5232_R3604
411.3
RHH5204_R3575
355.3
RHH5261_R3633
545.3
RHH5296_R3662
251.8
Vd2 gdTCR nTPM: 284.6
Samples: 4
Max nTPM: 341.6
Min nTPM: 192.0
RHH5234_R3606
284.7
RHH5206_R3577
341.6
RHH5263_R3635
320.0
RHH5298_R3664
192.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
