HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.5 nTPM
HPA Brain:52.0 nTPM
GTEx:13.5 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:43.1 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062660
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
1898 Male, age 80, left hemisphere 55.7
2148 Female, age 91, left hemisphere 47.2
1855 Male, age 76, left hemisphere 44.9
2621 Female, age 67, right hemisphere 42.3
1911 Female, age 85, right hemisphere 32.4
2529 Female, age 94, left hemisphere 22.4
Dentate gyrus
nTPM: 43.4
1927 Female, age 91, both hemispheres 57.0
2010 Male, age 76, both hemispheres 53.0
2531 Female, age 67, both hemispheres 41.4
2246 Female, age 85, both hemispheres 40.7
2528 Male, age 74, both hemispheres 34.3
2530 Female, age 94, left hemisphere 34.1
Entorhinal gyrus
nTPM: 35.0
1787 Male, age 76, left hemisphere 45.0
1938 Female, age 85, left hemisphere 40.4
2613 Female, age 94, left hemisphere 37.8
2764 Male, age 80, right hemisphere 35.7
2686 Male, age 75, right hemisphere 34.5
2117 Female, age 91, right hemisphere 16.5
Hippocampus, CA1
nTPM: 52.0
2749 Male, age 80, left hemisphere 82.4
1873 Female, age 85, both hemispheres 51.2
2045 Male, age 76, both hemispheres 49.2
2527 Male, age 74, both hemispheres 44.2
2082 Female, age 91, right hemisphere 32.9
Hippocampus, CA2
nTPM: 37.2
1963 Male, age 80, left hemisphere 56.3
1892 Male, age 76, both hemispheres 46.7
2249 Male, age 74, both hemispheres 40.8
2113 Female, age 91, right hemisphere 32.2
2437 Female, age 94, left hemisphere 27.8
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 45.3
2137 Male, age 80, left hemisphere 64.9
2861 Female, age 67, both hemispheres 57.2
2620 Female, age 94, left hemisphere 50.3
1867 Male, age 76, both hemispheres 37.0
2436 Male, age 74, both hemispheres 36.8
1891 Female, age 85, both hemispheres 25.7
Parahippocampal cortex
nTPM: 35.5
2245 Female, age 91, both hemispheres 53.1
1990 Female, age 91, right hemisphere 45.3
2250 Female, age 67, right hemisphere 45.1
1933 Female, age 85, both hemispheres 41.7
2018 Male, age 76, both hemispheres 34.3
2692 Male, age 74, both hemispheres 30.3
2622 Female, age 67, right hemisphere 29.6
2693 Female, age 94, both hemispheres 27.9
1850 Male, age 80, both hemispheres 25.2
2532 Female, age 72, left hemisphere 22.7
Perirhinal gyrus
nTPM: 38.4
1847 Female, age 91, left hemisphere 56.9
2521 Female, age 94, right hemisphere 45.9
1794 Male, age 80, right hemisphere 31.9
2848 Male, age 76, right hemisphere 31.2
1841 Female, age 85, right hemisphere 26.4
Subiculum
nTPM: 31.0
1977 Female, age 85, both hemispheres 47.7
2619 Male, age 74, both hemispheres 34.4
1901 Male, age 80, both hemispheres 31.3
2729 Female, age 91, right hemisphere 29.2
2042 Male, age 76, both hemispheres 29.1
2438 Female, age 94, left hemisphere 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 56.2
Min nTPM: 0.5
Std nTPM: 10.8
Median nTPM: 10.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 47.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 41.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 40.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 40.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 38.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 37.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 36.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 35.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10169-103B7 60 years, female 20.7
FF:10153-102I9 76 years, female 13.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Subiculum
nTPM: 28.2
Samples: 4

Max nTPM: 37.9
Min nTPM: 23.7
Sample A Female 37.9
Sample B Female 24.9
Sample C Male 26.1
Sample D Male 23.7
Dorsal hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 32.2
Min nTPM: 23.6
Sample A Female 32.2
Sample B Female 29.1
Sample C Male 23.6
Sample D Male 24.5
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 32.3
Min nTPM: 23.0
Sample A Female 32.3
Sample B Female 23.0
Sample C Male 31.2
Sample D Male 30.4
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 34.1
Min nTPM: 19.7
Sample A Female 27.9
Sample B Female 19.7
Sample C Male 30.2
Sample D Male 34.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 39.6
Min nTPM: 21.6
Sample A Male 21.6
Sample B Male 22.4
Sample C Female 28.3
Sample D Female 39.6
Hippocampal formation
nTPM: 43.1
Samples: 4

Max nTPM: 47.1
Min nTPM: 33.8
Sample A Male 33.8
Sample B Male 45.1
Sample C Female 47.1
Sample D Female 46.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
70805896 Antisense, RP_050725_02_E02, Mouse strain C57BL/6J (56 days, male) 10.4
68162201 Antisense, RP_041122_01_F11, Mouse strain C57BL/6J (56 days, male) 9.9

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