HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.2 nTPM
HPA Brain:70.8 nTPM
GTEx:28.2 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:84.7 nTPM
Mouse:63.6 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062278
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 48.6
1855 Male, age 76, left hemisphere 44.6
2529 Female, age 94, left hemisphere 42.7
1911 Female, age 85, right hemisphere 41.8
2148 Female, age 91, left hemisphere 37.2
2621 Female, age 67, right hemisphere 37.0
Dentate gyrus
nTPM: 40.8
2531 Female, age 67, both hemispheres 60.9
1927 Female, age 91, both hemispheres 51.2
2010 Male, age 76, both hemispheres 40.9
2530 Female, age 94, left hemisphere 31.4
2246 Female, age 85, both hemispheres 31.3
2528 Male, age 74, both hemispheres 29.1
Entorhinal gyrus
nTPM: 70.8
2613 Female, age 94, left hemisphere 121.9
1787 Male, age 76, left hemisphere 78.4
1938 Female, age 85, left hemisphere 74.3
2764 Male, age 80, right hemisphere 66.6
2686 Male, age 75, right hemisphere 53.2
2117 Female, age 91, right hemisphere 30.3
Hippocampus, CA1
nTPM: 52.5
2045 Male, age 76, both hemispheres 87.2
2749 Male, age 80, left hemisphere 78.5
2527 Male, age 74, both hemispheres 36.0
1873 Female, age 85, both hemispheres 30.8
2082 Female, age 91, right hemisphere 29.9
Hippocampus, CA2
nTPM: 43.1
1892 Male, age 76, both hemispheres 75.6
2437 Female, age 94, left hemisphere 48.1
2249 Male, age 74, both hemispheres 42.7
1963 Male, age 80, left hemisphere 33.7
2113 Female, age 91, right hemisphere 32.1
1940 Female, age 85, left hemisphere 26.5
Hippocampus, CA3
nTPM: 66.5
1867 Male, age 76, both hemispheres 91.8
2436 Male, age 74, both hemispheres 81.6
2137 Male, age 80, left hemisphere 78.3
2861 Female, age 67, both hemispheres 57.2
2620 Female, age 94, left hemisphere 50.6
1891 Female, age 85, both hemispheres 39.3
Parahippocampal cortex
nTPM: 50.8
1990 Female, age 91, right hemisphere 74.9
1933 Female, age 85, both hemispheres 55.9
1850 Male, age 80, both hemispheres 55.6
2018 Male, age 76, both hemispheres 54.2
2622 Female, age 67, right hemisphere 49.6
2532 Female, age 72, left hemisphere 49.2
2245 Female, age 91, both hemispheres 47.6
2692 Male, age 74, both hemispheres 41.5
2250 Female, age 67, right hemisphere 40.3
2693 Female, age 94, both hemispheres 38.9
Perirhinal gyrus
nTPM: 52.6
1847 Female, age 91, left hemisphere 79.0
1841 Female, age 85, right hemisphere 50.6
2848 Male, age 76, right hemisphere 47.2
1794 Male, age 80, right hemisphere 45.3
2521 Female, age 94, right hemisphere 40.9
Subiculum
nTPM: 47.2
1977 Female, age 85, both hemispheres 66.7
1901 Male, age 80, both hemispheres 56.2
2438 Female, age 94, left hemisphere 50.2
2042 Male, age 76, both hemispheres 43.4
2619 Male, age 74, both hemispheres 39.0
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 104.6
Min nTPM: 1.3
Std nTPM: 15.9
Median nTPM: 25.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 104.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 77.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 72.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 65.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 62.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 59.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 58.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 57.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 53.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.6
FF:10153-102I9 76 years, female 26.3
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.7
Pig sample Sample description nTPM
Subiculum
nTPM: 51.2
Samples: 4

Max nTPM: 70.2
Min nTPM: 41.0
Sample A Female 70.2
Sample B Female 41.0
Sample C Male 50.0
Sample D Male 43.4
Dorsal hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 63.8
Min nTPM: 14.8
Sample A Female 31.2
Sample B Female 32.8
Sample C Male 63.8
Sample D Male 14.8
Entorhinal cortex
nTPM: 84.8
Samples: 4

Max nTPM: 89.3
Min nTPM: 79.5
Sample A Female 86.6
Sample B Female 83.6
Sample C Male 79.5
Sample D Male 89.3
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 47.9
Min nTPM: 19.0
Sample A Female 19.0
Sample B Female 26.2
Sample C Male 47.9
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 84.1
Min nTPM: 48.6
Sample A Male 55.4
Sample B Male 66.3
Sample C Female 48.6
Sample D Female 84.1
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 21.1
Sample A Male 29.6
Sample B Male 24.4
Sample C Female 21.1
Sample D Female 25.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
71358578 Antisense, RP_050725_03_E07, Mouse strain C57BL/6J (56 days, male) 10.4
68798944 Antisense, RP_050217_01_F05, Mouse strain C57BL/6J (56 days, male) 9.7

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